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From: gerd.leitinger-at-meduni-graz.at
Date: Mon, 1 Oct 2007 10:25:28 -0500
Subject: [Microscopy] TEM preparation: RMC ultramicrotome

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Dear all,

Our lab is considering the purchase of an RMC PowerTome PT-PC Ultramicrotome.

Has anybody got experience with this type of microtome they would like to share?
Or with RMC ultramicrotomes in general?

Thank you

Gerd Leitinger

--
Dr. Gerd Leitinger

Institute of Cell Biology, Histology and Embryology
Center for Molecular Medicine
Medical University of Graz
Harrachgasse 21
A-8010 Graz
Austria

Tel. +43 316 380 4237
Fax. +43 316 380 9625
Mailto: Gerd.Leitinger-at-meduni-graz.at






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From: mraderma-at-physiology.med.uvm.edu
Date: Mon, 1 Oct 2007 13:45:29 -0500
Subject: [Microscopy] what to do with RCA EMU-4?

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I received this message from Paula Flicker and offered to post it on the
microscopy list server. If you are interested, if possible, answer directly to
Paula. If you answer to me I will forward your message.

Michael Radermacher
University of Vermont




X-from: "Flicker, Paula (NIH/NIGMS) [E]" {FLICKERP-at-NIGMS.NIH.GOV}

A non-scientist colleague has purchased a house with an electron
microscope in the basement. She brought in the manual. It is an RCA
EMU-4 owned by a George Christov.

Any ideas of someone who wants this machine and could come take it away?
Otherwise, instruction on how to properly dispose of it would be
welcome.

thank you,
Paula

Paula F. Flicker, Ph.D.
Program Director, NIGMS
Building 45, Room 2AS.13H
45 Center Drive MSC 6200
Bethesda, MD 20892-6200
301-594-0828
fax: 301-480-2004


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From: delannoy-at-jhmi.edu
Date: Mon, 1 Oct 2007 13:49:33 -0500
Subject: [Microscopy] Balzers freeze etch

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Hello listservers,
We have a Balzers Freeze etching system, BAF 400D, that is available for purchase. The system is operating, can do shadowing, etching and freeze fracture. It is an old system, so we are open to all offers.


Michael Delannoy
Associate Director, JHMI Microscope Facility
Dept. of Cell Biology
Physiology G-04
725 N. Wolfe St.
Baltimore, MD 21205
(410) 955-1365 office
(410) 614-6890 lab

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From: delannoy-at-jhmi.edu
Date: Mon, 1 Oct 2007 13:49:41 -0500
Subject: [Microscopy] Balzers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


Hello listservers,
We have a Balzers Freeze etching system, BAF 400D, that is available for purchase. The system is operating, can do shadowing, etching and freeze fracture. It is an old system, so we are open to all offers.


Michael Delannoy
Associate Director, JHMI Microscope Facility
Dept. of Cell Biology
Physiology G-04
725 N. Wolfe St.
Baltimore, MD 21205
(410) 955-1365 office
(410) 614-6890 lab

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From: donovan-at-uoregon.edu
Date: Mon, 1 Oct 2007 14:00:28 -0500
Subject: [Microscopy] Re: what to do with RCA EMU-4?

Contents Retrieved from Microscopy Listserver Archives
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In case anyone is interested here is a picture of it!

http://www.historic-glendale.net/microscope_history.htm

john

At 11:53 AM 10/1/2007, you wrote:



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From: bigelow-at-umich.edu
Date: Mon, 1 Oct 2007 14:44:55 -0500
Subject: [Microscopy] RE: UHV Epoxy

Contents Retrieved from Microscopy Listserver Archives
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Well, I can't help with the scope as a whole, but I can say that the
Wehnelt chambers make great odds and ends holders for your desk. That
nifty RCA logo in gold-colored metal will make you the envy of your
coworkers. You can use them for planters, too!

Randy

-----Original Message-----
X-from: donovan-at-uoregon.edu [mailto:donovan-at-uoregon.edu]
Sent: Monday, October 01, 2007 2:02 PM
To: Tindall, Randy D.

In case anyone is interested here is a picture of it!

http://www.historic-glendale.net/microscope_history.htm

john

At 11:53 AM 10/1/2007, you wrote:



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In addition to the G1 epoxy compound sold by
Gatan, Varian markets a UHV epoxy called Torr
Seal that is rated for pressures down to 10-9
Torr. The temperature range quoted for this
material is -45 to +120°C, +120°C being the
common bake-out temperature for vacuum systems.
However, this is a pretty hard and dense material
when fully cured, and might possibly serve at
considerably higher temperatures. I don't have
any information on this matter. LDS Vacuum sells
an Epoxy that is advertised as being equivalent
to Torr Seal, and which is now on sale at a very
reasonable price.
--
Wilbur C. Bigelow, Professor Emeritus
Materials Sci. & Engr., Univ. of Michigan
Ann Arbor, Michigan 48109-2136
e-mail: bigelow-at-umich.edu;
Fx:734-763-4788; Ph:734-975-0858
Address mail to: 2911 Whittier Court
Ann Arbor, MI 48104-6731


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From: walck-at-southbaytech.com
Date: Mon, 1 Oct 2007 22:42:43 -0500
Subject: [Microscopy] Ask about how high temperature Gatan G1 epoxy can

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

There is an article by Fiore and Herring in the first MRS TEM prep book on a
ceramic high temperature epoxy solution for hot stages. MRS Vol 115, page
125 that describes a cross section technique by putting their samples in a
cast block of ceramic adhesive. The ceramic adhesive that they used was
Ceramabond 569 from Aremco Products, Inc. They were able to use it up to
approximately 1300C.

I thought that I had a paper that showed the same ceramic adhesive used as a
glue joint between two pieces, but I can't find it.






-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com

-----Original Message-----
X-from: zhangj16-at-msu.edu [mailto:zhangj16-at-msu.edu]
Sent: Sunday, September 30, 2007 12:16 PM
To: Walck-at-SouthBayTech.com

Dear all

I have the question about how high temperature Gatan G1 epoxy can survive
for a in-situ TEM study. I dont have the instruction of G1 in hand right
now. Thank you for any opinion and experience.


Jiaming Zhang

Research Assistant
Department of Chem. Eng. & Mater. Sci.
Michigan State University
Tel: 517-231-8013
Email: zhangj16-at-egr.msu.edu


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19, 22 -- Cc: {zhangj16-at-msu.edu}
19, 22 -- Subject: High Temp epoxy
19, 22 -- Date: Mon, 1 Oct 2007 20:43:01 -0700
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From: kderr-at-nysbc.org
Date: Tue, 2 Oct 2007 11:01:25 -0500
Subject: [Microscopy] Tech position in membrane protein crystallization

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RESEARCH TECHNICIAN POSITION IN MEMBRANE PROTEIN CRYSTALLIZATION.

A research technician position is available immediately at the New York
Structural Biology Center in New York City
(http://www.nysbc.org/facilities/CEM). The candidate will focus on
implementing a high-throughput screen to identify conditions for
crystallizing membrane proteins for analysis by cryo-electron
microscopy. This work will involve setting up parallel crystallization
trials using a liquid-handling robot and a microdialysis block designed
in our laboratory. The plan is to image these samples using automated
software and a 100-sample multi-specimen holder to be purchased from a
commercial source and implemented at NYSBC. The candidates will be part
of an energetic NIH-funded research center focused on membrane protein
structure determination by X-ray crystallography and cryo-electron
crystallography.

Our laboratory is fully equipped for all aspects of protein expression,
crystallization and electron microscopy. We have a strong collaboration
with a group involved in protein target selection, cloning and
expression screening as part of the NIH Protein Structure Initiative.
The current position requires skills in electron microscopy. Although
specific experience is preferred, general experience in imaging and/or
biophysics may suffice.

The initial appointment is for one year and renewable for up to three
years. Interested candidates should e-mail cover letter, full CV and
contact information for three professional referees to:

David Stokes
stokes-at-nysbc.org
New York Structural Biology Center
tel: 212-939-0660 x9116
http://nysbc.org/
fax: 646-219-0300





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From: jflaci-at-ms.sapientia.ro
Date: Tue, 2 Oct 2007 16:06:25 -0500
Subject: [Microscopy] JSM-5200 lens messup... help needed!

Contents Retrieved from Microscopy Listserver Archives
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Hello there!

Yesterday I was cleaning the condenser pole piece of this sem, and
acidentally messed up the two small pole pieces on the table. There is no
damage done in the pieces, but I do not know now how to assemble.
The question is: there are two pole pairs, with different hole diameters?
So I have to pair them according to the hole diameter, or not?

Thanks in advance,

Jakab-Farkas Laszlo
Laboratory technician

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From: jhe1-at-tulane.edu
Date: Tue, 2 Oct 2007 19:56:02 -0500
Subject: [Microscopy] AskAMicroscopist: Image analysis software

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This Question was submitted to Ask-A-Microscopist by (jhe1-at-tulane.edu)
from http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Tuesday, October 2, 2007 at 10:58:31
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Email: jhe1-at-tulane.edu
Name: Jibao He

Organization: Tulane University

Education: Graduate College

Title: Image analysis software

Question: Dear Colleagues:

We are looking for image analysis software to process TEM and SEM images to get size distribution information. If you are using a good one, please recommend it to us including purchase contact information.

Thanks for your time and advice,

Jibao He
Electron Microscopy Lab

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From: opmills-at-mtu.edu
Date: Tue, 2 Oct 2007 20:00:53 -0500
Subject: [Microscopy] viaWWW: textured substrate

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Email: opmills-at-mtu.edu
Name: Owen Mills

Organization: Michigan Tech University

Title-Subject: [Filtered] textured substrate

Question: All,

I need a substrate with a fairly uniform .5 to 1um texture. I'll be depositing ~1 um and larger particles on the substrate for 3D SEM study. The sample will be carbon coated. The substrate should be something that is cheap, can be cut to put on a SEM mount and easy to acquire.

Do you think etching a substrate of some kind would produce the desired texture? Any ideas what would be suitable for this etching?

Thanks,

Owen Mills
Michigan Tech

Login Host: 141.219.192.45
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From: beth.moseley-at-hitachi-hta.com
Date: Tue, 2 Oct 2007 20:01:37 -0500
Subject: [Microscopy] viaWWW: Windows on the NanoWorld - FREE Workshop

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Email: beth.moseley-at-hitachi-hta.com
Name: Beth Moseley

Organization: Hitachi High Technologies America

Title-Subject: [Filtered] Windows on the NanoWorld - FREE Workshop

Question: A FREE workshop and hands-on forum on electron and ion beam imaging and analysis with speakers from Industry, Academia and Instrument Design.

October 23-25, 2007 Clemson University/Advanced Materials Research Lab Clemson, SC

Tuesday, October 23, 2007 (at the Clemson Conference Center) Introduction to Advanced Analytical and Imaging Techniques

Wednesday, October 24, 2007 (at the Clemson AMRL) Advanced Imaging and Analysis: low kV (SEM, STEM, FIB + SEM...)

Thursday, October 25, 2007 (at the Clemson AMRL)Advanced Imaging and Analysis: high kV (TEM, STEM...)

Presentations will be given by expert speakers in a casual seminar format and will be complemented by lab based investigations of advanced topics. Technique intro-ductions will be given on the first day, advanced case-studies and research based topics on the second and third day. There will also be opportunities to run your own samples on advanced imaging and analysis tools in the Clemson Advanced Materials Research Lab.

For questions and hotel reservations please e-mail NSDevent-at-hitachi-hta.com or contact Beth Moseley beth.moseley-at-hitachi-hta.com) at 925.218.2821. Please RSVP by Monday, October 15, 2007 to attend.


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From: klangwor-at-uoregon.edu
Date: Tue, 2 Oct 2007 20:02:16 -0500
Subject: [Microscopy] viaWWW: SEM Nano-particle contamination

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Email: klangwor-at-uoregon.edu
Name: Kurt Langworthy

Organization: University of Oregon

Title-Subject: [Filtered] SEM Nano-particle contamination

Question: I've noticed the gun arcing on our Zeiss FEG SEM (the arcing can be heard easily and seen on our ampmeter even with the beam blanked!). Due to the amount of nano-particle and nano-wire samples we've recently been working with I've become curious if nano-particle contamination is a possible contributor to the poor performance of the gun. Have any of you experienced nano-particle contamination in your systems? What sort of behaviors did you document?
Best Regards,
Kurt

Kurt Langworthy
CAMCOR
University of Oregon
541-346-4778



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From: amgusman-at-ucdavis.edu
Date: Tue, 2 Oct 2007 20:50:30 -0500
Subject: [Microscopy] MicroscopyListserverviaWWW: Sputter coater thickness

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Email: {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
Name: Andrea Gusman

Title-Subject: [Filtered] Sputter coater thickness

Question: I am trying to determine how thick my sputter coater will coat at different time intervals so I am conducting an experiment. I made a small block out of Spurrs resin, sputter coated it, and then placed the block back in the mold and covered the gold layer with more Spurrs to sandwich it between resin. I then trimmed the block and cross sectioned it on a microtome to obtain thin sections. I placed the thin sections in the TEM and measured the gold layer.
The time intervals I used were 30 seconds, 90 seconds, 1 min, and 2 min.
Does anyone know how thick of a layer a sputter coater should coat with a gold target at those time intervals? Or what is a suitable thickness for SEM samples?
Also does anyone have any other suggestions on ways to determine the thickness besides thin sectioning?
Thanks!


---------------------------------------------------------------------------


--
Andrea Gusman
Staff Research Associate I
Chemical Engineering & Material Science
University of California, Davis
530-752-0284

==============================Original Headers==============================
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4, 11 -- Subject: MicroscopyListserverviaWWW: Sputter coater thickness
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From: dac-at-research.umass.edu
Date: Tue, 2 Oct 2007 22:18:54 -0500
Subject: [Microscopy] Re: Sputter coater thickness

Contents Retrieved from Microscopy Listserver Archives
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Hi Andrea,

The way you are doing this is exactly what one should do for a check of
the system in the conditions you use. The TEM measurement of the layer
will be an accurate value to use. For given conditions this should be
very repeatable. The thickness of the layer is dependent on many things
including the design of the coater/electrodes. For a given unit the
coating thickness will be directly proportional to the CURRENT and TIME;
the current is affected by the kV applied, the gas (typically Argon),
and the pressure of the gas.

For the Polaron E5100 sputter coater the following formula applies:
T = mA * kV * t * k

T=thickness (Angstroms = 1x10^-10 meters)
kV = 2.2
mA is the set/observed current
k (Argon) = 5 Note: k (Nitrogen) = 2
(k is a factor based on the gas and the system design)
For the E5100.......
} Time (min)
} mA 1 2 3
} 5 55 110 165
} 6 66 132 198
} 7 77 154 231
} 8 88 176 264
} 9 99 198 297
} 10 110 220 330
} 11 121 242 363
} 12 132 264 396
} 13 143 286 429
} 14 154 308 462
} 15 165 330 495
} 16 176 352 528
} 17 187 374 561
} 18 198 396 594
} 19 209 418 627
} 20 220 440 660

If you have a manual for the sputter coater it may give a formula that
accounts for the design of the system and lets you plug in the
parameters you can control (voltage and current, and time). Contact the
manufacturer if you don't have a manual, or else get back to the list
with the make/model of the machine and the parameters you are using and
someone will probably be able to help.

Note that sputtered layers much below 10nm are likely to be
discontinuous and in cross section it may appear as a discontinuous band.

Hope this helps.

Dale

amgusman-at-ucdavis.edu wrote:
--------------------------------------------------------------------
}
} Email: {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
} Name: Andrea Gusman
}
} Title-Subject: [Filtered] Sputter coater thickness
}
} Question: I am trying to determine how thick my sputter coater will coat at different time intervals so I am conducting an experiment. I made a small block out of Spurrs resin, sputter coated it, and then placed the block back in the mold and covered the gold layer with more Spurrs to sandwich it between resin. I then trimmed the block and cross sectioned it on a microtome to obtain thin sections. I placed the thin sections in the TEM and measured the gold layer.
} The time intervals I used were 30 seconds, 90 seconds, 1 min, and 2 min.
} Does anyone know how thick of a layer a sputter coater should coat with a gold target at those time intervals? Or what is a suitable thickness for SEM samples?
} Also does anyone have any other suggestions on ways to determine the thickness besides thin sectioning?
} Thanks!
}
}
} ---------------------------------------------------------------------------
}
}
} --
} Andrea Gusman
} Staff Research Associate I
} Chemical Engineering & Material Science
} University of California, Davis
} 530-752-0284
}
} ==============================Original Headers==============================
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} 4, 11 -- From: Andrea Gusman {amgusman-at-ucdavis.edu} (by way of MicroscopyListserver)
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--
} {(((º}
L L
} {(((º} .·´¯`·.¸ {º)))} { ¸.·´¯`·.¸ } {(((º} ¸.·´¯¯¯¯¯¯¯

Dale A. Callaham
Central Microscopy Facility
The University of Massachusetts
Amherst, MA 01003

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From: oshel1pe-at-cmich.edu
Date: Wed, 3 Oct 2007 07:29:17 -0500
Subject: [Microscopy] Re: viaWWW: textured substrate

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Andrea

a similar question came up in July about measuring sputter coating
thicknes and I suggested the following as a simple alternative:


a simple method that I used to check the thickness of sputter coatings
was to photograph some spherical particles on carbon/formvar coated
grids in the TEM (I used both 0.142um latex beads and 20nm colloidal
gold). The trick is to find the same particles before and after coating
so I simply photographed a distinctive cluster very near the centre of
the grid. I then sputtered the grids in the coater and re-photographed.
In my case I halved the diameter difference for a few particles for
thickness.

....

This may not be the perfect method but it's quick and easy if you have
the bits and of course the TEM. A refinement would be to use coated
finder grids but I simply used some centre marked grids and it only took
a few minutes to find the same particles after coating. The only other
problem would be if the coatings get greater than 20-30nm the grid
background may become denser.

If you're keen you could compare both methods, but then how would you
know which was most accurate. I hope this helps.

Malcolm

Malcolm Haswell
e.m. unit
School of Health, Natural and Social Sciences
Fleming Building
University of Sunderland
Tyne & Wear
SR1 3SD
UK

e-mail: malcolm.haswell-at-sunderland.ac.uk

----- Original Message -----
X-from: dac-at-research.umass.edu

Owen,

Do you have other requirements for the substrate? Conductivity, etc.

Try this: make a monolayer of beads, silica, polystyrene, whatever.
Carefully layer over that something like methyl methacrylate.
Polymerize and dissove the beads (HF for silica, etc.). This will
leave the plastic with a texture the size of the beads, although as
indentations. If you need positive relief (domes), the methacrylate
can be used as a mold to make a second cast.
This is a simplified version of the procedure Paul Sims and Ralph
Albrecht used to make casts of collagen films with 20 nm resolution.
I've got the paper in a box somewhere, but you could email Ralph
(UW-Madison) for a copy.

If the final surface needs to be conductive, you can sputter-coat it.

Phil

} Email: opmills-at-mtu.edu
} Name: Owen Mills
}
} Organization: Michigan Tech University
}
} Title-Subject: [Filtered] textured substrate
}
} Question: All,
}
} I need a substrate with a fairly uniform .5 to 1um texture. I'll be
} depositing ~1 um and larger particles on the substrate for 3D SEM
} study. The sample will be carbon coated. The substrate should be
} something that is cheap, can be cut to put on a SEM mount and easy
} to acquire.
}
} Do you think etching a substrate of some kind would produce the
} desired texture? Any ideas what would be suitable for this etching?
}
} Thanks,
}
} Owen Mills
} Michigan Tech
}
} Login Host: 141.219.192.45
--
Philip Oshel
Microscopy Facility Supervisor
Biology Department
024C Brooks Hall
Central Michigan University
Mt. Pleasant, MI 48859

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From: oshel1pe-at-cmich.edu
Date: Wed, 3 Oct 2007 07:45:44 -0500
Subject: [Microscopy] Re: MicroscopyListserverviaWWW: Sputter coater

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Andrea,

Ballpark, the thickness is roughly 10nm/minute in our Denton Desk II
with gold or gold/palladium.
But, this is strongly dependent on the gas pressure in the chamber,
current, target (Au, Au/Pd, or something else) and target-sample
distance, so that figure may not be relevant to your coater.

The second question, how thick for samples, is entirely dependent on
1) what kind of samples (how conductive are they, what's the surface
topography [smooth, setose, etc.], 2) what accelerating voltage do
you need (low voltage, less coating maybe), 3) how are the samples
mounted? better the electrical mounts, therefore path to ground, can
allow for thinner coats 4) what resolution (what magnification) do
you need -- the higher the mag/resolution the thinner the coat
required (thick of looking at a lawn after a the first snowfall. If
the snow is light, it coats all the grass blades, but you can still
see each individual blade and it's veins; if the snow is heavy, all
you see is the snow. 5) Etc.
So there's no simple answer to "how much?" It depends on "what questions?"

Phil

} This Question/Comment was submitted to the Microscopy Listserver
} using the WWW based Form at
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} please copy both {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
} as well as the MIcroscopy Listserver
} ---------------------------------------------------------------------------
}
} Email: {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
} Name: Andrea Gusman
}
} Title-Subject: [Filtered] Sputter coater thickness
}
} Question: I am trying to determine how thick my sputter coater will
} coat at different time intervals so I am conducting an experiment. I
} made a small block out of Spurrs resin, sputter coated it, and then
} placed the block back in the mold and covered the gold layer with
} more Spurrs to sandwich it between resin. I then trimmed the block
} and cross sectioned it on a microtome to obtain thin sections. I
} placed the thin sections in the TEM and measured the gold layer.
} The time intervals I used were 30 seconds, 90 seconds, 1 min, and 2 min.
} Does anyone know how thick of a layer a sputter coater should coat
} with a gold target at those time intervals? Or what is a suitable
} thickness for SEM samples?
} Also does anyone have any other suggestions on ways to determine
} the thickness besides thin sectioning?
} Thanks!
}
}
} ---------------------------------------------------------------------------
}
}
} --
} Andrea Gusman
} Staff Research Associate I
} Chemical Engineering & Material Science
} University of California, Davis
} 530-752-0284
--
Philip Oshel
Microscopy Facility Supervisor
Biology Department
024C Brooks Hall
Central Michigan University
Mt. Pleasant, MI 48859

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From: jacques.faerber-at-ipcms.u-strasbg.fr
Date: Wed, 3 Oct 2007 08:00:19 -0500
Subject: [Microscopy] Re: MicroscopyListserverviaWWW: Sputter coater thickness

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Andrea

A fast way to evaluate the layer thickness is to put the sample on a OM
glass slide, and coat both together. After coating, one look at the
color of the layer on the slide, by transparency in front of a sheet of
paper (at daylight). Blue is in the 5-10 nm range, then green is up to
20 nm, green/yelowish is 20-30 nm, yellow more then 30 nm, and the
transparency desappears (against the daylight) with more than 100 nm.
In the same time, on can control the size and homogeneity of the
deposit, versus current, distance to the target, and gas pressure.

With the way you have used combined with this one, you can calibrate the
slides.


The needed thickness is depending of much things : what kind of SEM you
have (W source or FEG), what kind of sample you are looking, what are
the performences/quality of the coater (ultimate vaccum, quality of the
magnetron head, is the power supply in current or voltage regulated, etc.).

The "thickness" is a bit a miss-leading concept, in that matter. Most
sputter coaters give on most samples gold grains, and not a layer (sugar
powdered on the cake and not butter spread on the bread). What one need
is the smallest grains, separated by a distance short enough to allow
the electron to tunnel from one to the next. And in most case, one have
big grains, separated by a too long distance. On must than let the
grains grow in size (and thickness) until there is a contact between
them. And then, the film is too thick, like a ft. snow on a ploughed
field, instead of only a layer of frost... If you need to look at a tree
in the field, it doesn't matter, but if you are searching the seeds
between the groves, you must try something other...

I would say : put the less gold necessary to have the picture you need,
and try in the same time the lowest beam energy which gives a resolution
adequate with the details you want to see.

Hope it helps


J. Faerber
IPCMS-GSI
(Institut de Physique et Chimie des Matériaux de Strasbourg
Groupe Surface et Interfaces)
23, rue de Loess ; BP43
67034 Strasbourg CEDEX 2
France

Tel 00 33(0)3 88 10 71 01
Fax 00 33(0)3 88 10 72 48
E-mail Jacques.Faerber-at-ipcms.u-strasbg.fr



amgusman-at-ucdavis.edu a écrit :
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} ---------------------------------------------------------------------------
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} Email: {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
} Name: Andrea Gusman
}
} Title-Subject: [Filtered] Sputter coater thickness
}
} Question: I am trying to determine how thick my sputter coater will coat at different time intervals so I am conducting an experiment. I made a small block out of Spurrs resin, sputter coated it, and then placed the block back in the mold and covered the gold layer with more Spurrs to sandwich it between resin. I then trimmed the block and cross sectioned it on a microtome to obtain thin sections. I placed the thin sections in the TEM and measured the gold layer.
} The time intervals I used were 30 seconds, 90 seconds, 1 min, and 2 min.
} Does anyone know how thick of a layer a sputter coater should coat with a gold target at those time intervals? Or what is a suitable thickness for SEM samples?
} Also does anyone have any other suggestions on ways to determine the thickness besides thin sectioning?
} Thanks!
}
}
} ---------------------------------------------------------------------------
}
}
} --
} Andrea Gusman
} Staff Research Associate I
} Chemical Engineering & Material Science
} University of California, Davis
} 530-752-0284
}
} ==============================Original Headers==============================
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From: jacques.faerber-at-ipcms.u-strasbg.fr
Date: Wed, 3 Oct 2007 08:30:54 -0500
Subject: [Microscopy] Re: Scroll pumps, good or bad?

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Warton

I didn't see much answer to your question. So here are my 2 cents.

If the first generations of the scroll pumps were not very reliable,
with mechanical problems and generating much dust, what the
manufacturers can offer now is in most case correct.

The first limitation of these pumps, is the ultimate vacuum. Two stages
pumps go down to 4E-2 mbar, three stages pumps to less than E-2 mbar.
This means that one can use a scroll as roughing pump neither for a diff
pump, nor for a old turbo pump, which hasn't Gaede or Holweck stages at
the high vac side. With such turbos, one could perhaps work in a
stationary mode (high vac, virtually no flow), put it will stall as soon
as one have a consequent flow (starting up from the atmospheric
pressure, process with a gas inlet).

Scroll pumps are made to work with newer turbo pumps (so-called
macro-torr, turbo-drag, compound, molecular, hybrid, etc), which support
a few mbar at their roughing side, typically the vacuum of a diaphragm
pump. In comparison with the diaphragm pump, the use of a scroll gives a
better ultimate vacuum, less noise, a bit less maintenance, a much more
flow.

In comparison with the rotary vane pump, one can give some pro and
contra for each.

Pro Scroll :

Clean, "dry" (i.e. without hydrocarbons) vacuum.
Seal exchange is very easy and fast

Contra :

Expensive
Anualy seal exchange (c.f. above)
Seal is expensive too (but maintenance kit for a rotary vane too)
No idea about it longevity (at 10 years or more)
Noisy


Pro Rotary vane

A very mature technology
Better ultimate vacuum
15-20 years life expectancy
Less expensive at purchase
Less maintenance
Really noiseless for some models

Contra

Oil pump, with all wellknown backstreaming problems
Maintenance by a skilled mechanic, (or a good fiddler)

I would not hesitate to put a scroll on a SEM, with a today turbo pump.
The price difference is nothing in comparison with the SEM. And if one
has a maintenance contract, one has nothing to deal with these aspects.

About models, I would avoid the Varian SH100 which has much long term
problems. It has been been replaced by the SH110, which seems to work
well. The Edwards models are OK too. I don't know them from other
manufacturer.

All models seems to need a few hours to go down to their ultimate vacuum.

No connections with the mentioned manufacturer, only comments from a
critical user !

Hope it helps

J. Faerber
IPCMS-GSI
(Institut de Physique et Chimie des Matériaux de Strasbourg
Groupe Surface et Interfaces)
23, rue de Loess ; BP43
67034 Strasbourg CEDEX 2
France

Tel 00 33(0)3 88 10 71 01
Fax 00 33(0)3 88 10 72 48
E-mail Jacques.Faerber-at-ipcms.u-strasbg.fr



Wharton.Sinkler-at-uop.com a écrit :
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} On the face of it, scroll pumps on an SEM would seem to be a great idea, replacing what is widely acknowledged to be the main source of hydrocarbon contamination (roughing pump oil), and thus avoiding the possibility of a single bad incident which can cause contamination for the remainder of an instrument's life.
}
} However, I'm a little concerned that the reliability of these pumps is not what it needs to be. What have others' experiences been - are scroll pumps a good or bad idea? Do the benefits of removing roughing pump oil outweigh the inconveniences, specifically not as good reliability as an oil roughing pump? Is there any concern using a scroll pump to back a diffusion pump, i.e. do these only make sense combined with a turbo?
}
} Are there particular models to avoid? And are there tricks to installing or handling them which will minimize trouble?
}
} Thanks,
} Wharton
}
}
} *************************************************************
} Wharton Sinkler, PhD.
} UOP LLC
} 50 E. Algonquin Rd.
} Des Plaines IL 60017-5017
} mailto: wharton.sinkler-at-uop.com
} tel 847-391-3878
} fax 847-391-3719
}
}
}
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From: jeff-at-tss-consulting.com
Date: Wed, 3 Oct 2007 08:57:39 -0500
Subject: [Microscopy] viaWWW:Job Opening Preparing Samples for TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

This Question/Comment was submitted to the Microscopy Listserver
using the WWW based Form at http://www.microscopy.com/MLFormMail.html
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Email: jeff-at-tss-consulting.com
Name: Jefrey A West

Organization: TSS Consulting Ltd

Title-Subject: [Filtered] TEM Sample Preparation

Question: Preparing Samples for TEM
I am networking to people so that I can find candidates to fill a job preparing samples of semiconductor (single crystal) materials for TEM analysis in a local Corporation.

The person to fit the job I am engaged to fill will have experience with sample preparation for TEM or SEM with Semi- conductor types of materials. Currently the company is working with II-V and III-V materials and others.

Please pass on to anyone who you think might talk to me about this opportunity. Please contact me by email or by phone- your preference:
Ph: 877-489-2425
Jeff

Login Host: 72.93.95.75
---------------------------------------------------------------------------

==============================Original Headers==============================
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From: sampleprep-at-earthlink.net
Date: Wed, 3 Oct 2007 10:11:11 -0500
Subject: [Microscopy] Re: MicroscopyListserverviaWWW: Sputter coater

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Andrea:

Phil is exactly right. Sputtering is a very dynamic process that will coat
your samples with varying amounts of conductive metal depending on the
parameters described. For our purposes in SEM we overlook many of these
variables and think we are "controlling" the process but we really are not.
I only need to use the uneven wear of the sputter target as an example of
the un-evenness inherent in the process. The only way to get something
close to a "reproducible thickness" is by a FTM (Film Thickness Monitor)
which ignores the dynamics of the process described by Phil but calculates
the amount of metal deposited on a Quartz Crystal, sort of a "Micro-balance"
method. This method is not without its own flaws but is as good as it gets
for our purposes. It's much more complex than I will go into but leaping
through some of the hoops you've been describing will only get you stressed
and not provide any meaningful results in the end. If FTM is not an option,
best to do a sequential coating of a specimen till it looks good
(Contrast/Resolution with minimal charging) in your microscope, then use
those parameters as the starting point for future work.

P.S.

I'm sure Chuck Garber would have had much to say about this thread. I will
miss him and his spin he put on the list server topics. He and I would
sometimes "spar" privately regarding competitive issues. However, we always
remained friendly and exchanged ideas about many concepts from time to time.
RIP Chuck


Al Coritz
Technical Engineer
Electron Microscopy Sciences
www.emsdiasum.com


-----Original Message-----
X-from: oshel1pe-at-cmich.edu [mailto:oshel1pe-at-cmich.edu]
Sent: Wednesday, October 03, 2007 8:46 AM
To: Sampleprep-at-earthlink.net

Andrea,

Ballpark, the thickness is roughly 10nm/minute in our Denton Desk II
with gold or gold/palladium.
But, this is strongly dependent on the gas pressure in the chamber,
current, target (Au, Au/Pd, or something else) and target-sample
distance, so that figure may not be relevant to your coater.

The second question, how thick for samples, is entirely dependent on
1) what kind of samples (how conductive are they, what's the surface
topography [smooth, setose, etc.], 2) what accelerating voltage do
you need (low voltage, less coating maybe), 3) how are the samples
mounted? better the electrical mounts, therefore path to ground, can
allow for thinner coats 4) what resolution (what magnification) do
you need -- the higher the mag/resolution the thinner the coat
required (thick of looking at a lawn after a the first snowfall. If
the snow is light, it coats all the grass blades, but you can still
see each individual blade and it's veins; if the snow is heavy, all
you see is the snow. 5) Etc.
So there's no simple answer to "how much?" It depends on "what questions?"

Phil

} This Question/Comment was submitted to the Microscopy Listserver
} using the WWW based Form at
} {http://www.microscopy.org/MicroscopyListserver/MLFormMail.htmlhttp://www.m
icroscopy.org/MicroscopyListserver/MLFormMail.html
}
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replying
} please copy both {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
} as well as the MIcroscopy Listserver
}
---------------------------------------------------------------------------
}
} Email: {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
} Name: Andrea Gusman
}
} Title-Subject: [Filtered] Sputter coater thickness
}
} Question: I am trying to determine how thick my sputter coater will
} coat at different time intervals so I am conducting an experiment. I
} made a small block out of Spurrs resin, sputter coated it, and then
} placed the block back in the mold and covered the gold layer with
} more Spurrs to sandwich it between resin. I then trimmed the block
} and cross sectioned it on a microtome to obtain thin sections. I
} placed the thin sections in the TEM and measured the gold layer.
} The time intervals I used were 30 seconds, 90 seconds, 1 min, and 2 min.
} Does anyone know how thick of a layer a sputter coater should coat
} with a gold target at those time intervals? Or what is a suitable
} thickness for SEM samples?
} Also does anyone have any other suggestions on ways to determine
} the thickness besides thin sectioning?
} Thanks!
}
}
}
---------------------------------------------------------------------------
}
}
} --
} Andrea Gusman
} Staff Research Associate I
} Chemical Engineering & Material Science
} University of California, Davis
} 530-752-0284
--
Philip Oshel
Microscopy Facility Supervisor
Biology Department
024C Brooks Hall
Central Michigan University
Mt. Pleasant, MI 48859

==============================Original Headers==============================
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5, 24 -- To: amgusman-at-ucdavis.edu
5, 24 -- From: Philip Oshel {oshel1pe-at-cmich.edu}
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coater
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From: walck-at-southbaytech.com
Date: Wed, 3 Oct 2007 11:38:39 -0500
Subject: [Microscopy] MicroscopyListserverviaWWW: Sputter coater thickness

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Andrea,
Just let me make a few comments.

About Gold Coatings:
Gold is not the best coating for SEM applications. I know that it has been
used for a long time, but it goes down as a lumpy structure because of the
way the film grows. It doesn't take much magnification before you start to
see that structure in the SEM. Now if your sputter coater is the less
expensive type with only a roughing pump, may I suggest that you use a Au-Pd
target instead. That goes down a little more smoother than gold. It is
still not the best coating to use for high resolution work, but it is better
than gold. If you have a more high end sputter coating system, then go with
other coatings such as Cr, Ir, or W.

About measuring the film thickness with the TEM:
When you cut your samples, if you cut them parallel to the surface, you will
compress the thickness of the films and it can give you an error. It is
best to cut them perpendicular, i.e. on edge to avoid that. Also, you need
to calibrate your TEM magnification carefully. I highly recommend the
Mag-I-Cal sample that was developed by John McCaffrey. We sell that
standard, but so do a lot of others. It is simply the best calibration
standard for the TEM. When I was a PPG, we had to do a bi-annual
calibration of the microscopes as part of the QS-9000 certification process.
When I tried doing the calibration with two different standards to cover the
entire magnification range, I found that the overlap range didn't match
well. The Mag-I-Cal sample just worked great. I have even used it to
calibrate a high resolution SEM at high magnifications. It is not as easy
to do that with that sample, but I trusted the values better than other SEM
standards at magnifications above 200,000X.



-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com

-----Original Message-----
X-from: amgusman-at-ucdavis.edu [mailto:amgusman-at-ucdavis.edu]
Sent: Tuesday, October 02, 2007 6:54 PM
To: Walck-at-SouthBayTech.com


This Question/Comment was submitted to the Microscopy Listserver using the
WWW based Form at
{http://www.microscopy.org/MicroscopyListserver/MLFormMail.htmlhttp://www.mi
croscopy.org/MicroscopyListserver/MLFormMail.html
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Email: {mailto:amgusman-at-ucdavis.eduamgusman-at-ucdavis.edu
Name: Andrea Gusman

Title-Subject: [Filtered] Sputter coater thickness

Question: I am trying to determine how thick my sputter coater will coat at
different time intervals so I am conducting an experiment. I made a small
block out of Spurrs resin, sputter coated it, and then placed the block back
in the mold and covered the gold layer with more Spurrs to sandwich it
between resin. I then trimmed the block and cross sectioned it on a
microtome to obtain thin sections. I placed the thin sections in the TEM and
measured the gold layer.
The time intervals I used were 30 seconds, 90 seconds, 1 min, and 2 min.
Does anyone know how thick of a layer a sputter coater should coat with a
gold target at those time intervals? Or what is a suitable thickness for SEM
samples?
Also does anyone have any other suggestions on ways to determine the
thickness besides thin sectioning?
Thanks!


---------------------------------------------------------------------------


--
Andrea Gusman
Staff Research Associate I
Chemical Engineering & Material Science
University of California, Davis
530-752-0284

==============================Original Headers==============================
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==============================Original Headers==============================
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From: mike-at-bitplane.com
Date: Wed, 3 Oct 2007 14:31:59 -0500
Subject: [Microscopy] Bitplane Positions Available in the USA

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Bitplane is expanding its US team and asks for applications for the
following two positions. Feel free to forward this e-mail to anyone who
might be interested.

Position #1 – Central and South Eastern Region Sales Representative US /
Canada

Bitplane is looking for a biologist with strong computer skills and at least
one year of hands-on experience using a confocal or similar 3D advanced
light microscope.
The duties of this position include:
• Customer visits and analysis of customer's imaging needs.
• Demonstration of the software and onsite work with the customer
• Organization of exhibitions and workshops
• Sales support of existing customers

The candidate is expected to have an outgoing personality with strong
communication skills and should look forward to increased responsibility. At
least 50% travel will be required. Representative is required to live in the
territory they cover. Benefits include a base salary, performance based
commission, 401K plan, healthcare, and vacation. Representative will work
out of a home office. We offer a team of 18 people, fun to work with, and a
truly international environment that provides the resources required to
grow. We don't mind if the candidate does not have much business experience
and we are prepared to show him/her the sales skills at the job.

Position #2 – Sales Development Coordinator

Bitplane is looking for a candidate with a science background and knowledge
of the microscope community.
The duties of this position include :
• Identifying potential new regional customers via web searches,
literature searches, marketing campaigns, trade shows, and customer
referrals.
• Introduction of Bitplane products and services to potential
customers via email, phone, and Webex.
• Understanding potential customers needs related to products
offered by Bitplane.
• Organizing workshops and demonstrations for regional sales
representatives

The candidate is expected to have an outgoing personality, is detail
oriented, articulates clearly, exhibits a high level of professionalism, and
exceptional organization.  Travel is not required. Benefits include a base
salary, 401K plan, healthcare, and vacation. Representatives will work out
of a home office and travel is not required on routine basis. We offer a
team of 18 people, fun to work with, and a truly international environment
that provides the resources required to grow.

Applicants should reply with a letter stating what position they are
interested in, why they are qualified for the position, and enclose their
CV.

With best regards,
Mike

Bitplane Inc.
Michael C. Wussow
Vice President and General Manager Bitplane Inc.
 
Cell Phone:    651-336-4600
Fax:                 866-691-9112
Toll Free:       1-888-3D-BITPX (332-4879)
Visit Our Web Site At:  www.bitplane.com





==============================Original Headers==============================
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14, 32 -- Subject: Bitplane Positions Available in the USA
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From: Elliott-at-arizona.edu
Date: Wed, 3 Oct 2007 15:45:03 -0500
Subject: [Microscopy] University of Arizona EM job posting

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

The University of Arizona's Arizona Research Labs (ARL) is seeking an
outstanding candidate to serve as manager of the ARL Electron
Microscopy Core Facility located at the Arizona Health Sciences
Center (AHSC). The selected candidate will oversee day-to-day
operations of the facility, select/maintain equipment, design
techniques/protocols, and train/oversee users.

The AHSC and Main Campus Electron Microscopy Core Facilities are a
University of Arizona resource. These facilities are equipped to
provide both standard and specialized methods for transmission and
scanning electron microscopy. The structure of the facilities is
designed to accommodate the investigator who desires to undertake
electron microscopy study. Projects are accepted with the approval of
the facility manager.

Outstanding UA benefits include health, dental, vision, and life
insurance; paid vacation, sick leave, and holidays; UA/ASU/NAU
tuition reduction for the employee and qualified family members;
access to UA recreation and cultural activities; state retirement;
and more.

For more information please refer to Job #39315 on UA Career Track at
www.uacareertrack.com/.


_____________________

David Elliott Ph.D.
Assistant Professor - Department of Cell Biology and Anatomy
Director, Research Microscopy Core Service
University of Arizona College of Medicine
PO Box 245004
Tucson, AZ 85724

Voice: 520-626-7870
Fax: 520-626-2097

==============================Original Headers==============================
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From: walck-at-southbaytech.com
Date: Wed, 3 Oct 2007 16:11:10 -0500
Subject: [Microscopy] AskAMicroscopist: Image analysis software

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

If you are not going to do a lot of quantitative microscopy measurements,
then I would recommend that you buy the Image Processing Toolkit or Fovea
Pro from Reindeer Graphics (http://www.reindeergraphics.com/). These are
plug-ins that work in Adobe Photoshop. This is software that was written by
John Russ and Chris Russ. It is worth it just for some of the image
processing tools, but the quantitative microscopy tools are pretty good. It
may not have the bells and whistles and may be a little slower because of
working inside Photoshop, but it has some power. If you aren't going to be
doing stereology measurements day in and day out it is a good add-on to
Photoshop and much less expensive than some of the dedicated software
packages out there. Another benefit is that there is a full tutorial on the
package on the disk that comes with the software and you can buy John Russ'
book that complements the software (or rather the software complements his
book.)

Another point to make about this software is the level of help that you can
get from the author. I'm not sure that he advertises this, but I've had
some specific needs in the past where not only did John help me understand
that concept, he wrote a macro or routine that was helped me do what I
wanted to do. At PPG, we developed a quality test for one of our thin film
products that was based on the help that John had given me. That's why I am
a satisfied customer of this product.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com

-----Original Message-----
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Sent: Tuesday, October 02, 2007 6:01 PM
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This Question was submitted to Ask-A-Microscopist by (jhe1-at-tulane.edu) from
http://www.msa.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on
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Email: jhe1-at-tulane.edu
Name: Jibao He

Organization: Tulane University

Education: Graduate College

Title: Image analysis software

Question: Dear Colleagues:

We are looking for image analysis software to process TEM and SEM images to
get size distribution information. If you are using a good one, please
recommend it to us including purchase contact information.

Thanks for your time and advice,

Jibao He
Electron Microscopy Lab

---------------------------------------------------------------------------

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==============================Original Headers==============================
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19, 22 -- Subject: RE: [Microscopy] AskAMicroscopist: Image analysis software
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From: WORLD-SCIENCE-newsletter moderator :      WORLD-SCIENCE-newsletter-owner-at-yahoogroups.com
Date: 4 Oct 2007 04:31:45 -0000
Subject: Yahoo! Groups: You're invited! Join WORLD-SCIENCE-newsletter today.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

This Question was submitted to Ask-A-Microscopist by (ewgroth-at-gmail.com)
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Email: ewgroth-at-gmail.com
Name: Eric Roth

Organization: NYU

Education: Undergraduate College

Location: NY, NY

Title: Formvar Grids

Question: I've been attempting to make formvar grids. I've tried on three
recent occasions and have been expereiencing a reoccurant artifact. The artifacts are about 1um and smaller, prefectly round, and white with a dark halo. Also, the smaller ones seem to be occuring in a linear pattern with the larger ones dispersed randomly. When I'm cleaning the glass I do so in a circular pattern with a kimwipe. In the reflection, it looks clean. I'm stumped as to what I'm doing wrong. Today, the formvar was pulling off really well and I paid special attention to cleaning the glass properly, but the grids turned out worse than ever. Any suggestions would be greatly appreciated.
Thanks.


---------------------------------------------------------------------------

==============================Original Headers==============================
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From: benada-at-biomed.cas.cz
Date: Thu, 4 Oct 2007 01:41:15 -0500
Subject: [Microscopy] Re: AskAMicroscopist: Making Formvar Grids

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Hello,
from time to time we have similar problems. The artifacts about 1um could be the
holes. The small artifacts are are probably caused by some dirt that sticks on glass
surface. You cannot see it by an eye.

Please, check:
1) The air humidity in the room in which, you are making the Formvar grids. It
should be as low as possible.

2) The solvent (chloroform or dichlorethane) for making the working solution of
Formvar should be dry, so minimize the content of water residues in it. We are
keeping the solvent under molecular sieve or using freshly distilled one.

3) Let dissolve the Formvar powder is solvent for sufficient time to be sure, that all
Formvar powder is well dissolved.

4) Keep the Formvar solution in clean, tightly closed glass flask in the dark.

Best regards from Prague
Oldrich

------------------------------------------
Oldrich Benada
Institute of Microbiology, Acad. Sci. CR
Videnska 1083
142 20 Prague 4 - Krc
Czech Republic


On 3 Oct 2007 at 17:44, ewgroth-at-gmail.com wrote:

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} Email: ewgroth-at-gmail.com
} Name: Eric Roth
}
} Organization: NYU
}
} Education: Undergraduate College
}
} Location: NY, NY
}
} Title: Formvar Grids
}
} Question: I've been attempting to make formvar grids. I've tried on three
} recent occasions and have been expereiencing a reoccurant artifact. The artifacts are about 1um and smaller, prefectly round, and white with a dark halo. Also, the smaller ones seem to be occuring in a linear pattern with the larger ones dispersed randomly. When I'm cleaning the glass I do so in a circular pattern with a kimwipe. In the reflection, it looks clean. I'm stumped as to what I'm doing wrong. Today, the formvar was pulling off really well and I paid special attention to cleaning the glass properly, but the grids turned out worse than ever. Any suggestions would be greatly appreciated.
} Thanks.


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From: gerd.leitinger-at-meduni-graz.at
Date: Thu, 4 Oct 2007 06:35:33 -0500
Subject: [Microscopy] TEM summary: ultra stainers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

A few days ago, I asked the list about Phoenix TEM stainers.
This is a summary of my answers.

I got two answers. Apparently, there are two new models of stainers for contrasting TEM sections on the market:

(i) Phoenix TEM stainers marketed from Germany by Reichert - Labtec. www.reichert-labtec.de
(ii) There are other stainers, by Ted Pella, on the market now. www.tedpella.com

Warm thanks to both people who have answered me!
If anybody has actual lab experience with either one of the stainers, I would be grateful for their comment.

Gerd

--
Dr. Gerd Leitinger

Institute of Cell Biology, Histology and Embryology
Center for Molecular Medicine
Medical University of Graz
Harrachgasse 21
A-8010 Graz
Austria

Tel. +43 316 380 4237
Fax. +43 316 380 9625
Mailto: Gerd.Leitinger-at-meduni-graz.at






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From: Walter.Bobrowski-at-pfizer.com
Date: Thu, 4 Oct 2007 07:12:07 -0500
Subject: [Microscopy] Multi-well sample mold

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Can someone suggest a source for a multi-well mold to hold multiple
tissue samples for agar embedment prior to processing for histology an
LM examination?
Can someone suggest a vendor to fabricate a mold if required?
TIA

Walter F. Bobrowski
Sr. Scientist
Pfizer Global R&D
224 Eastern Point Rd
B274/0357N
Groton, CT 06340

TEL: 860-686-9426
FAX: 860-715-4919



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From: ahlst007-at-umn.edu
Date: Thu, 4 Oct 2007 09:47:53 -0500
Subject: [Microscopy] Tissue processor revisited

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Eric,

The artifacts are most likely holes as mentioned earlier. A method I've come across to eliminate them is to hold the slide just above the surface of the solvent for about twenty seconds or so after you've dunked it, allowing it to drip dry in the solvent vapors as opposed to drying directly in air.

Daryl Meyer
UW-Madison

----- Original Message -----
X-from: ewgroth-at-gmail.com

Hello Micro Listers,

I wish to thank those who responded to my
previous query of 9-25-07 on the resin
infiltration problems I sometimes have when
using an automated tissue processor for
preparation of specimens for transmission
electron microscopy. The information provided on
the LR White acrylic resin problem was very helpful.

However, the infiltration problem I have
encountered with some specimens when using an
epoxy resin was addressed by only one
respondent, who suggested I try the Spurr's
epoxy resin for its lower viscosity. But I
understand that one of its components, VCD, is
no longer being manufactured, so I'm reluctant
to use it (I do have a bottle of VCD, but its
years old). I would like to solve this problem
using an EPON type substitute. I have been using
a Embed-812 formulation successfully for
conventional and microwave non-automated
processing for many years. However, due to
increasing specimen processing loads, I would
like to use the automated processor as much as
possible.

1.Does anyone have an epoxy resin mixture that
they are willing to share that gives good
infiltration into specimens in the automated
tissue processor?

2. More generally, does anyone have a complete
protocol, fixation through resin infiltration,
that works for use in a tissue processor for
plant or animal tissues?

3. Are there specific processor conditions that
you use for the resin infiltration steps, like
agitation rates, time per resin change,
temperature, etc. that you feel are important
for good infiltration?

The details of my processor system, although
important to consider, were in my previous post
so I won't repeat them here.

Thanks for any helpful information you can give.

Gib
--
Gilbert (Gib) Ahlstrand, Electron Microscopist,
Imaging Center, University of Minnesota
123 Snyder Hall
St. Paul, MN 55108
http://www.cbs.umn.edu/ic

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From: mlibbee-at-gmail.com
Date: Thu, 4 Oct 2007 11:30:38 -0500
Subject: [Microscopy] Detection of Secondary Electrons

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SUBJECT: Secondary Electron Detection

My Failure Analysis group is acquiring a new high resolution FE SEM
and have investigated three well known leaders in SEM engineering and
manufacture. I transported the same samples to each performance
demonstration to assure accurate comparison and analysis of the
equipment. One of the microscopes obtained a series of SEI
micrographs with layers in oxide otherwise not present in the images
from the other SEMs. Subsequently, the presence of these layers was
confirmed in BEI mode. Why are the layers present in the data from
one SEM and not the others? I know signal detection varies based on
parameters and geomerty of the microscope (solid/take-off angles,
detector distance, working distance, ect.?), but does it vary enough
in different instruments to this extreme?

Unfortunatley, I can't divulge any more information regarding the
propietary sample! Thank you, in advance, for your time!

Regards,
Marissa

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From: PavelLozovyy-at-Eaton.com
Date: Thu, 4 Oct 2007 11:37:42 -0500
Subject: [Microscopy] RE: Welcome to the Microscopy ListServer:Info,Rules & FAQ

Contents Retrieved from Microscopy Listserver Archives
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Hello,

Can any one tell me difference between EMPA analysis using WD detector
and SEM/WDS spot analysis. Would there be any significant differences in
detection limits or precision?


Thank you,


Pavel
Supervisor
216-692-5479
cell 216-402-8087
www.atclabs.com



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From: mlibbee-at-gmail.com
Date: Thu, 4 Oct 2007 14:39:45 -0500
Subject: [Microscopy] Secondary Electron Detection

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

In response to the questions asked regarding my inquiry:

SEM: Jeol JSM-7500F
w-dist: 3mm
semi in-lens detector with r-filter
1kV

Marissa

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From: larry-at-cymru666.plus.com
Date: Thu, 4 Oct 2007 14:47:47 -0500
Subject: [Microscopy] RE: Welcome to the Microscopy ListServer:Info,Rules

Contents Retrieved from Microscopy Listserver Archives
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} ----------------------------------------------------------------------------
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The most significant difference is the number of WD spectrometers -
EPMA instruments can have up to 5 spectrometers with up to 4 crystals
in each spectrometer. I'm not aware of any current SEM system that
accomodates more than a single WD spectrometer. This means EPMA
instruments can do a lot more WD analysis and generally do it a lot
faster. The whole instrument is also designed for automated analyis
over large areas and long periods of time. While SEMs can do the
automated analysis, this capability is an add-on and not as
sophisticated as EPMAs.

Other differences:

1. EPMA instruments tend to use vertical WD spectrometers while SEMs
tend to use inclined spectrometers. This means that EPMA systems are
much more sensitive to the Z position of the sample, which needs
setting by light microscopy to withi a few microns. Inclined
spectrometers are much less sensitive to Z height. Conversely, the
vertical spectrometers remain in focus over a much wider X/Y area
while inclined spectrometers go out of focus at the edges of the
image for smaller regions.

2. EPMA instruments usually have very good stages, with good
resolution and repeatability. Mapping and automated analysis is
intended to be done over large areas by stage scanning, rather than
beam scanning. This is more difficult with standard SEM stages.

WD spectrometer energy resolution, sensitivity, etc is much more a
function of the spectrometer design rather than whether it is an EPMA
or SEM.

In case you don't know, JEOL make SEMs and EPMA instruments :-)

Regards,
--
Larry Stoter
JEOL (UK) Ltd
tel: +44-(0)1707-377117, fax: +44-(0)1707-373254, e-mail: larrys-at-jeoluk.com

PLEASE NOTE - Agressive SPAM filtering is employed. If you don't get
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you should get through. If you aren't, then there's a chance your
e-mail will never be seen.

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From: garyeaston-at-scannerscorp.com
Date: Thu, 4 Oct 2007 15:54:26 -0500
Subject: [Microscopy] CAMBRIDGE/LEICA/LEO SEM PART NEEDED

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi

In my experience it is possible to find an instrument that handles one
particular sample different to other similar instruments from competitive
manufacturers.

kV, spot size, detector position(s), chamber accessories, but most
importantly working distance all play their part. Some instruments are able
in their upper detector (through the lens mode) to include a contribution
obtained from converted backscatter which add BSE contrast to the image.
This is usually achieved by adjusting the working distance allowing the BSE
to strike components, generating the secondary's which are sucked up into
the upper detector. In some instruments the difference between 3mm WD and
6mm WD can be quite staggering!

Do not panic it is probably real data you are picking up.

This is one reason why I insist on clients taking critical specimens to ALL
the appropriate manufacturers for demonstrations, you never know what you
will find and it is found to be on some occasions instrument specific.

Be happy you found this out.

Steve Chapman
Protrain for EM training & consultancy world wide
www.emcourses.com
Tel +44 1280 816512 Fax +44 1280 814007
Mobile +44 7711 606967

----- Original Message -----
X-from: {mlibbee-at-gmail.com}
To: {protrain-at-emcourses.com}
Sent: Thursday, October 04, 2007 5:31 PM

Hi Listers,
I'm looking for a part for a Cambridge/Leica/LEO S240 SEM. It's
called an Ion Pump Light Baffle and it does two things: it shields any
light that may come from the ion pump and also isolates the ion pump
from the electron gun electrically. It looks exactly like the light
baffle on a Varian Cold Cathode Ion Gage but only bigger. Carl Zeiss
tells me that that they have none in stock and did not offer to build
one. Anyone out there have this part lying around just collecting
dust? I Google'd it, but nothing of any interest came up. Thanks in
advance.

Gary Easton, Pres.
Scanners Corporation
Refurbished SEM Sales/ Service, Cambridge/Leica/LEO our specialty
410-857-7633

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From: bharris-at-uoguelph.ca
Date: Fri, 5 Oct 2007 07:45:52 -0500
Subject: [Microscopy] Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
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Good Morning: The Institution has decided to push wireless internet
access into every corner of the campus. They also intend to boost the
RF (cell phone) signal strength. I operate 3 TEMs, a LEO EFTEM, a
cryo-Tecnai and an CM10. I worry that the TEMs will be affected by the
signal frequency and strength from these new sources. I am being asked
specific questions about which frequencies are harmful to our
operation and am
having trouble answering. If anyone has any experience or resources to
help me communicate the scope of the problem it would be much
appreciated. Thanks bob harris

Guelph Regional Integrated Imaging Facility (GRIIF)
Transmission Electron Microscope Facility
Dept. of Molecular and Cell Biology
New Science Complex, 488 Gordon St.
University of Guelph
Guelph Ontario, Canada, N1G 2W1
Phone: 519-824-4120 X 56409
Fax: 519-837-1802




----- End forwarded message -----


Guelph Regional Integrated Imaging Facility (GRIIF)
Transmission Electron Microscope Facility
Dept. of Molecular and Cell Biology
New Science Complex, 488 Gordon St.
University of Guelph
Guelph Ontario, Canada, N1G 2W1
Phone: 519-824-4120 X 56409
Fax: 519-837-1802





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From: oshel1pe-at-cmich.edu
Date: Fri, 5 Oct 2007 08:05:00 -0500
Subject: [Microscopy] Re: Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
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micromavens,

Please reply to list -- I'm in the same boat, except the IT people
here don't care if they cause interference. They just chose 2.4 GHz
for the WiFi, and if that interfers with cordless phones, it's your
fault. Instruments? Not even a consideration to them.
$*#^&$(#&(.

Phil

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From: zaluzec-at-microscopy.com
Date: Fri, 5 Oct 2007 08:28:44 -0500
Subject: [Microscopy] Administrivia: Subject Titles

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Colleagues:

I will remind you to please use Subject Titles in your
messages that reflect the question/answer. If you
are replying to a posting and the Subject Title needs
changing to reflect this, please do so.

This allows subscribers to scan the messages for relevance
as well as helps when individuals data mine the archives using
the on-line search engines.

Cheers,

Nestor
Your Friendly Neighborhood SysOp

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From: gerd.leitinger-at-meduni-graz.at
Date: Fri, 5 Oct 2007 08:41:48 -0500
Subject: [Microscopy] TEM: correction summary ultrastainer

Contents Retrieved from Microscopy Listserver Archives
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Hi,

Martin Storre from Nanofilm Technologie GmbH has given me new information on their TEM stainer, so I have to correct the summary I gave earlier.

Besides the Leica stainer, there is only one (and not two) new TEM grid stainer available. It was produced by Nanofilm Technologie GmbH Germany in cooperation with two scientists at the FU Berlin.

In the US, its distributor are Ted Pella; whereas in Germany, Austria, or Switzerland, it is distributed By Reichert Labtech.

Gerd

------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

--
Dr. Gerd Leitinger

Institute of Cell Biology, Histology and Embryology
Center for Molecular Medicine
Medical University of Graz
Harrachgasse 21
A-8010 Graz
Austria

Tel. +43 316 380 4237
Fax. +43 316 380 9625
Mailto: Gerd.Leitinger-at-meduni-graz.at






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From: jbs-at-temple.edu
Date: Fri, 5 Oct 2007 10:29:42 -0500
Subject: [Microscopy] Cameras

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Hi,

I know that this has been addressed in various ways on this forum,
but...

We are thinking of buying a set of the newer digital cameras to use
with Nikon Eclipse scopes. We are looking for color accuracy,
sufficient sensitivity for "bright" fluorescence, and simplicity of
the software. We are considering either firewire of USB 2
connections, and CMOS or CCD models

To date, we have thought about the Nikon DSF1, Qimaging 3, the
Jenoptik ProgRes CT3 or C#, the XLI-3, and the Lumenera infinity
models.

Has anyone done a side-by-side evaluation of these models, or could
suggest an additional one for consideration? It is probably best to
answer off list.

Thank you very much.

Joel

--
Joel B. Sheffield, Ph.D.
Biology Department, Temple University
1900 North 12th Street
Philadelphia, PA 19122
jbs-at-temple.edu
(215) 204 8839, fax (215) 204 0486
http://astro.temple.edu/~jbs


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From: beth-at-plantbio.uga.edu
Date: Fri, 5 Oct 2007 16:39:16 -0500
Subject: [Microscopy] microscopy job

Contents Retrieved from Microscopy Listserver Archives
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Hi all,
Happy Friday! There's a job opening here at the University of
Georgia. Please reply to Michael Hahn {hahn-at-ccrc.uga.edu} if you are
interested in this position.
have a great week-end,
Beth

Postdoctoral OR Senior Research Technician Position
University of Georgia
Complex Carbohydrate Research Center
Microscopist
A position is open at either the postdoctoral or senior research
technician level to work on the immunolocalization of carbohydrate
structures in the cell walls of agronomically important crop plants
using an extensive library of monoclonal antibodies. Demonstrated
experience with light (visible and fluorescence) and electron (TEM
and SEM) microscopy is required; experience with laser confocal
microscopy is desirable.
All interested applicants should forward curriculum vitae and list of
three references to: Michael Hahn, University of Georgia, Complex
Carbohydrate Research Center, 315 Riverbend Road, Athens, GA
30602-4712; e-mail: hahn-at-ccrc.uga.edu; fax: 706-542-4412. Review of
applications will begin September 15, 2007 and will continue until
position is filled.
The University of Georgia is an EEO/AA employer.

**********************************************************************
Beth Richardson
Electron Microscopy Lab Coordinator
Plant Biology Department
University of Georgia
Athens, GA 30602-7271

http://www.plantbio.uga.edu/emlab/

Phone - (706) 542-1790 & FAX - (706) 542-1805

"Between the two evils,
I always pick the one I never tried before". Mae West (1893-1980)
*******************************************************************

"And it's only the giving that makes you what you are".
Wond'ring Aloud, Jethro Tull (Aqualung)

************************************************************************
***
The Friends of the Marine Institute - Join Today!
www.friendsofugami.org




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From: john.mardinly-at-intel.com
Date: Fri, 5 Oct 2007 19:44:28 -0500
Subject: [Microscopy] Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
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Bob
We did extensive testing on a lot of wireless devices, and the
only interference we found was when a walkie-talkie was transmitting
right next to the pre-amp of the EDX system, which smeared the EDX peaks
badly. Aside from that, there was no effect on the electron beam (that
was for a 2010F, but the SEM guys did similar testing and found no
effect, so don't worry.

John Mardinly
Intel
This is not an opinion of Intel Corporation.

-----Original Message-----
X-from: bharris-at-uoguelph.ca [mailto:bharris-at-uoguelph.ca]
Sent: Friday, October 05, 2007 5:46 AM
To: Mardinly, John


Good Morning: The Institution has decided to push wireless internet
access into every corner of the campus. They also intend to boost the
RF (cell phone) signal strength. I operate 3 TEMs, a LEO EFTEM, a
cryo-Tecnai and an CM10. I worry that the TEMs will be affected by the
signal frequency and strength from these new sources. I am being asked
specific questions about which frequencies are harmful to our
operation and am
having trouble answering. If anyone has any experience or resources to
help me communicate the scope of the problem it would be much
appreciated. Thanks bob harris

Guelph Regional Integrated Imaging Facility (GRIIF)
Transmission Electron Microscope Facility
Dept. of Molecular and Cell Biology
New Science Complex, 488 Gordon St.
University of Guelph
Guelph Ontario, Canada, N1G 2W1
Phone: 519-824-4120 X 56409
Fax: 519-837-1802




----- End forwarded message -----


Guelph Regional Integrated Imaging Facility (GRIIF)
Transmission Electron Microscope Facility
Dept. of Molecular and Cell Biology
New Science Complex, 488 Gordon St.
University of Guelph
Guelph Ontario, Canada, N1G 2W1
Phone: 519-824-4120 X 56409
Fax: 519-837-1802





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From: corvos-at-aol.com
Date: Sat, 6 Oct 2007 21:40:18 -0500
Subject: [Microscopy] viaWWW: SEM - LEO 1525 service and parts

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This Question/Comment was submitted to the Microscopy Listserver
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Email: corvos-at-aol.com
Name: Walter Protheroe

Organization: E-MAC, Inc.

Title-Subject: [Filtered] SEM - LEO 1525 service and parts

Question: I have a customer in the Houston, TX area looking for an independent service organization to take over his LEO 1525. Preferably base no further than the Dallas area if possible. Also, I would like inquires from individuals who can also supply parts for the LEO 1525.

Any help or recommendations from users would be passed along...

Regards,

Walter Protheroe
E-MAC, Inc.


Login Host: 64.12.116.144
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From: bob-at-rockisland.com
Date: Mon, 8 Oct 2007 09:37:36 -0500
Subject: [Microscopy] Re: Wi-Fi and RF interference

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Hi Everyone,

Please correct me if I am wrong, but doesn't the FCC regulate the
frequencies that may be used by different devices?

Is it possible to shield your instruments, perhaps with a Faraday cage?
A partial cage made of wire mesh stapled onto movable partitions (grounded
together) - like the partitions that divide office space into cubicles might
even do the job. One would need to know the minimum mesh size of hardware
cloth needed to block that frequency.

Take care, Bob Carter

Lopez Island, WA

----- Original Message -----
X-from: {oshel1pe-at-cmich.edu}
To: {bob-at-rockisland.com}
Sent: Friday, October 05, 2007 6:05 AM


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From: hyi-at-emory.edu
Date: Mon, 8 Oct 2007 10:19:14 -0500
Subject: [Microscopy] Contamination on TEM

Contents Retrieved from Microscopy Listserver Archives
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Dear Microscopy Researchers:

We have had problem in recent years with contamination on our TEM. As
a consequence, we have to change objective aperture strip as frequent
as every 4-5 months. We use liquid nitrogen daily. We clean film
plates periodically. We minimize the time when we have to open the
camera chamber to change films. But the problem persists.

I suspect the reason we are getting more contamination than years ago
when we only looked at resin embedded samples on scope is that we have
had increasing number of users who look at nanoparticles. Unlike
biological material, these nano particles may not inhere to support
film as well therefore may “fly” away when beam hits them. This
problem can be worse when particles are not in a single layer on
support film. Also, users often do negative staining of these
nanoparticles in order to see the coating. I assume too much PTA or
UA dried onto the grids can contribute to the problem as well.

We use our scope at 75 KV and usually use 10 or 20µm objective
apertures for adequate contrast. This means there are only 1 or 2
apertures we can use in a standard objective aperture strip. Objective
aperture strips are very expensive (about $1300/ea). Obviously we
cannot use them as disposable items so often.

My questions are:

1. Do you have many users looking at nanoparticles or negatively
stained materials on your scope, If yes, how long do you think I should
expect an objective aperture to last based on your experience.
2. Is there anything else we should do to minimize contamination and
prolong the life of objective apertures.

Thank you very much in advance.

Hong
Emory SOM EM



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From: astreet-at-qualcomm.com
Date: Mon, 8 Oct 2007 10:45:03 -0500
Subject: [Microscopy] Re: Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I work in a very "RF rich" environment that not only includes 802.11x
in every corner of the campus, but every cell phone air interface (RF
transmit/receive channel) in use today anywhere in the world. We have
two FE-SEMs and three FIB tools in our lab, and have never observed
any interference from RF sources (60Hz power lines are another
story...).


Alan Street
Senior Staff Support Engineer/Manager
Focused Ion Beam/Failure Analysis Services
Qualcomm CDMA Technologies
5775 Morehouse Drive
San Diego, CA 92121
USA
astreet-at-qualcomm.com



On 05 Oct 2007, at 2:55 PM, bharris-at-uoguelph.ca wrote:

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} Good Morning: The Institution has decided to push wireless internet
} access into every corner of the campus. They also intend to boost the
} RF (cell phone) signal strength. I operate 3 TEMs, a LEO EFTEM, a
} cryo-Tecnai and an CM10. I worry that the TEMs will be affected by the
} signal frequency and strength from these new sources. I am being asked
} specific questions about which frequencies are harmful to our
} operation and am
} having trouble answering. If anyone has any experience or resources to
} help me communicate the scope of the problem it would be much
} appreciated. Thanks bob harris
}
} Guelph Regional Integrated Imaging Facility (GRIIF)
} Transmission Electron Microscope Facility
} Dept. of Molecular and Cell Biology
} New Science Complex, 488 Gordon St.
} University of Guelph
} Guelph Ontario, Canada, N1G 2W1
} Phone: 519-824-4120 X 56409
} Fax: 519-837-1802
}
}
}
}
} ----- End forwarded message -----
}
}
} Guelph Regional Integrated Imaging Facility (GRIIF)
} Transmission Electron Microscope Facility
} Dept. of Molecular and Cell Biology
} New Science Complex, 488 Gordon St.
} University of Guelph
} Guelph Ontario, Canada, N1G 2W1
} Phone: 519-824-4120 X 56409
} Fax: 519-837-1802
}
}
}
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From: allardlfjr-at-ornl.gov
Date: Mon, 8 Oct 2007 12:51:21 -0500
Subject: [Microscopy] Re: Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Well, I guess if the solution is partitions and wire mesh etc., to
get WiFi with no interference, or just use our present ethernet...I
think I'll stick to ethernet! :-)

Larry




At 9:40 AM -0500 10/8/07, bob-at-rockisland.com wrote:
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--
Dr. Lawrence F. Allard
Distinguished Research Staff Member
High Temperature Materials Laboratory
Microscopy Group
Materials Science and Technology Division
Oak Ridge National Laboratory
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PO Box 2008
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courier service)
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From: beaurega-at-westol.com
Date: Mon, 8 Oct 2007 13:40:09 -0500
Subject: [Microscopy] Re: Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi,

Your EM column and the electronics are encased in metal parts and cabinets
that are grounded, I hope. A Faraday cage is a shield. Shielding is used
to contain or keep out electric fields and RF. So your EM is a nearly
perfect Faraday Shield, if properly grounded to the earth over a low
resistance path to a driven earth ground.

The comments from John and Alan state that they don't see the problem. I
can see why.

Here's a little paradox of sorts. How come a wireless RF transceiver right
next to your PC is not interferring with your PC but it does with your
grounded EM thirty feet away? The FCC and manufacturers are a few
shielding steps ahead of us. Even the inside surface of a plastic PC case
is metalized and grounded to reduce interference.

JMO,

Paul
Amateur Radio Station KC8O, extra class and commercial FCC license holder
for over thirty years.

At 09:38 AM 10/8/07 -0500, you wrote:
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From: dac-at-research.umass.edu
Date: Mon, 8 Oct 2007 14:06:09 -0500
Subject: [Microscopy] Re: Contamination on TEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Hong,

The aperture strips just simply do need cleaning or replacing at
intervals. Where you are using very small apertures the problem will get
to a significant level much more quickly. I think that something like a
60um obj aperture is fairly common with 60-80kV and most microscopes,
but there are so many variables and designs I assume you need the small
apertures for your work. But they will need more frequent cleaning or
replacement.

We get 2 routine services a year as part of our service contracts. All
apertures, fixed and strips, get changed at least once a year - and
basically need it; if we had heavier usage we would need to do this at
both intervals. The CL and OL strips get changed more frequently as
needed, by me. We use a 120/60/60/60 (um) OL strip in our old JEOL 100S,
almost entirely used with a 60um choice. The strips are Molybdenum, and
I clean them in our vacuum evaporator (ancient, Kinney KDP-2 ODP model),
heating in a tungsten boat to a "bright orange" heat for a few minutes
at ~ 5x10-5 torr; too hot and you will melt the strip to the boat. Be
careful about any exact Voltage/Current recommendations and go by visual
color. The exact values will depend on your unit and the particular boat
(length, width, gage, etc). Experiment and err to the low side, checking
the apertures to see if they were cleaned and not melting to the boat.
It used to be expected that the apertures would be cleaned, and the info
was in the scope manuals.... This is not some substandard operation. I
think the service engineers had problems in using client evaporators
reliably (very understandable) and so THEY quit cleaning, and most
people don't do it themselves and just pay for the new ones now.

I have been using a few strips for over 12 yr. I also "burn" the fixed
CL discs the same. The vendor service engineer tells me that I am about
the only one who cleans the apertures anymore, but the results are good
and resolution tests are fine so it is obviously possible to do this.
Again, this used to be the norm....

If you do this, caution the service engineer ahead of time to be careful
removing the apertures to avoid damage. Actually some of my strips are
fairly wrinkled (have been bent and smoothed out...) but work like new
ones. They DO need to be flat and have non-deformed aperture edges, but
the cosmetics do not matter otherwise.

You may have problems with vendors not wanting to do this; if there is a
problem in the fixed CL discs it it much trouble to change; you have to
understand their position. But if you have a spare set cleaned that look
good there should be no problem; check them carefully under a dissecting
scope for roundness and contamination. The strips are easily changed
yourself so it should be no issue. But you might want to keep a new
strip on hand; if there are beam/image problems they may blame your
apertures and insist on new ones even if that is not the problem. I have
NOT had this problem - our JEOL engineers tolerate my quirky ways and it
all works fine.

Hope this helps.

Dale Callaham
UMASS Amherst

hyi-at-emory.edu wrote:
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} Dear Microscopy Researchers:
}
} We have had problem in recent years with contamination on our TEM. As
} a consequence, we have to change objective aperture strip as frequent
} as every 4-5 months. We use liquid nitrogen daily. We clean film
} plates periodically. We minimize the time when we have to open the
} camera chamber to change films. But the problem persists.
}
} I suspect the reason we are getting more contamination than years ago
} when we only looked at resin embedded samples on scope is that we have
} had increasing number of users who look at nanoparticles. Unlike
} biological material, these nano particles may not inhere to support
} film as well therefore may “fly” away when beam hits them. This
} problem can be worse when particles are not in a single layer on
} support film. Also, users often do negative staining of these
} nanoparticles in order to see the coating. I assume too much PTA or
} UA dried onto the grids can contribute to the problem as well.
}
} We use our scope at 75 KV and usually use 10 or 20µm objective
} apertures for adequate contrast. This means there are only 1 or 2
} apertures we can use in a standard objective aperture strip. Objective
} aperture strips are very expensive (about $1300/ea). Obviously we
} cannot use them as disposable items so often.
}
} My questions are:
}
} 1. Do you have many users looking at nanoparticles or negatively
} stained materials on your scope, If yes, how long do you think I should
} expect an objective aperture to last based on your experience.
} 2. Is there anything else we should do to minimize contamination and
} prolong the life of objective apertures.
}
} Thank you very much in advance.
}
} Hong
} Emory SOM EM
}
}
}
} ==============================Original Headers==============================
} 10, 20 -- From hyi-at-emory.edu Mon Oct 8 10:19:14 2007
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--
} {(((º}
L L
} {(((º} .·´¯`·.¸ {º)))} { ¸.·´¯`·.¸ } {(((º} ¸.·´¯¯¯¯¯¯¯

Dale A. Callaham
Central Microscopy Facility
The University of Massachusetts
Amherst, MA 01003

==============================Original Headers==============================
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From: dac-at-research.umass.edu
Date: Mon, 8 Oct 2007 14:24:27 -0500
Subject: [Microscopy] Wi-Fi and RF interference

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

In response to this, I would just say that the comparison isn't exactly
correct. PCs use digital logic (think thresholds, and designed-in noise
immunity....) and thus will be much less susceptible to certain levels
of RF interference while much critical business-end circuitry on TEMs is
by it's nature analog and IF the circuits picked up RF signals it could
cause interference... The FCC does have standards and assuming those
standards are met there may still be problems, and one of the suggested
solutions IF interference is observed is move the offending equipment
away, or reorient, etc..

I do not mean to suggest that the proliferation of wireless does
actually cause problems.

Dale



beaurega-at-westol.com wrote:
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} ----------------------------------------------------------------------------
}
} Hi,
}
} Your EM column and the electronics are encased in metal parts and cabinets
} that are grounded, I hope. A Faraday cage is a shield. Shielding is used
} to contain or keep out electric fields and RF. So your EM is a nearly
} perfect Faraday Shield, if properly grounded to the earth over a low
} resistance path to a driven earth ground.
}
} The comments from John and Alan state that they don't see the problem. I
} can see why.
}
} Here's a little paradox of sorts. How come a wireless RF transceiver right
} next to your PC is not interferring with your PC but it does with your
} grounded EM thirty feet away? The FCC and manufacturers are a few
} shielding steps ahead of us. Even the inside surface of a plastic PC case
} is metalized and grounded to reduce interference.
}
} JMO,
}
} Paul
} Amateur Radio Station KC8O, extra class and commercial FCC license holder
} for over thirty years.
}
} At 09:38 AM 10/8/07 -0500, you wrote:
} }
} }
} } ----------------------------------------------------------------------------
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} } ----------------------------------------------------------------------------
} }
} } Hi Everyone,
} }
} } Please correct me if I am wrong, but doesn't the FCC regulate the
} } frequencies that may be used by different devices?
} }
} } Is it possible to shield your instruments, perhaps with a Faraday cage?
} } A partial cage made of wire mesh stapled onto movable partitions (grounded
} } together) - like the partitions that divide office space into cubicles might
} } even do the job. One would need to know the minimum mesh size of hardware
} } cloth needed to block that frequency.
} }
} } Take care, Bob Carter
} }
} } Lopez Island, WA
} }
} } ----- Original Message -----
} } X-from: {oshel1pe-at-cmich.edu}
} } To: {bob-at-rockisland.com}
} } Sent: Friday, October 05, 2007 6:05 AM
} } Subject: [Microscopy] Re: Wi-Fi and RF interference
} }
} }
} } }
} } }
} } }
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} } } micromavens,
} } }
} } } Please reply to list -- I'm in the same boat, except the IT people
} } } here don't care if they cause interference. They just chose 2.4 GHz
} } } for the WiFi, and if that interfers with cordless phones, it's your
} } } fault. Instruments? Not even a consideration to them.
} } } $*#^&$(#&(.
} } }
} } } Phil
} } }
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} } } }
} } } } Good Morning: The Institution has decided to push wireless internet
} } } } access into every corner of the campus. They also intend to boost the
} } } } RF (cell phone) signal strength. I operate 3 TEMs, a LEO EFTEM, a
} } } } cryo-Tecnai and an CM10. I worry that the TEMs will be affected by the
} } } } signal frequency and strength from these new sources. I am being asked
} } } } specific questions about which frequencies are harmful to our
} } } } operation and am
} } } } having trouble answering. If anyone has any experience or resources to
} } } } help me communicate the scope of the problem it would be much
} } } } appreciated. Thanks bob harris
} } } }
} } } } Guelph Regional Integrated Imaging Facility (GRIIF)
} } } } Transmission Electron Microscope Facility
} } } } Dept. of Molecular and Cell Biology
} } } } New Science Complex, 488 Gordon St.
} } } } University of Guelph
} } } } Guelph Ontario, Canada, N1G 2W1
} } } } Phone: 519-824-4120 X 56409
} } } } Fax: 519-837-1802
} } } --
} } } Philip Oshel
} } } Microscopy Facility Supervisor
} } } Biology Department
} } } 024C Brooks Hall
} } } Central Michigan University
} } } Mt. Pleasant, MI 48859
} } }
} } } ==============================Original
} } } Headers==============================
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--
} {(((º}
L L
} {(((º} .·´¯`·.¸ {º)))} { ¸.·´¯`·.¸ } {(((º} ¸.·´¯¯¯¯¯¯¯

Dale A. Callaham
Central Microscopy Facility
The University of Massachusetts
Amherst, MA 01003

==============================Original Headers==============================
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From: jean-ross-at-uiowa.edu
Date: Mon, 8 Oct 2007 15:08:09 -0500
Subject: [Microscopy] viaWWW: JEOL 1230 filament life

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Email: jean-ross-at-uiowa.edu
Name: Jean Ross

Organization: Central Microscopy Research Facility, University of Iowa

Title-Subject: [Filtered] JEOL 1230 filament life

Question: Hi everyone,

I would like to get some feedback from others on this list who have a JEOL 1230 as to how many hours that you typically get from your filaments. We are trying to see if we are in the same ballpark as everyone else and we would like to better anticipate when we will need to change filaments. Thanks in advance.

Jean

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From: klangwor-at-uoregon.edu
Date: Mon, 8 Oct 2007 17:56:15 -0500
Subject: [Microscopy] viaWWW: small vacuum cleaner

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Email: klangwor-at-uoregon.edu
Name: Kurt Langworthy

Organization: University of Oregon

Title-Subject: [Filtered] small vacuum cleaner

Question: Does anyone know of a manufacture that produces a small vacuum cleaner tool to use on cleaning SEM parts, and to remove loose particles from samples?

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From: paul_hazelton-at-umanitoba.ca
Date: Mon, 8 Oct 2007 18:03:49 -0500
Subject: [Microscopy] Contamination on TEM

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hong


We look at over 3000 negative stained samples for viral diagnostics
every year. We have to scan at --|20,000x, and we print at 200,000x. In
my experience, both the moly and platinum apertures have very limited
time of use between cleaning when you try to use them for any high
magnification/high resolution work. This is especially true where the
samples are negatively stained. With an average workload of 60
samples/week, we would be cleaning the apertures every 1-2 weeks. In
short, I find them unsuitable.

I would never work a microscope without a gold foil objective aperture.
The high energy of the beam burns off contamination as it gathers on the
aperture. Periodically (every 2-3 months) I focus the beam and run it
around the edge of the aperture to clean it up. Don't know if that
helps, but I do it any way. I keep both a 20 and 30 micron gold foil
aperture in the scope, and usually use the 20. I replace the 20 micron
aperture maybe once a year - it is usually more like every 18 months. I
use the 30 when the 20 is getting a bit dirty and we haven't got any
spare 20 apertures in stock.

The major problem I have is keeping the specimen grid holder clean. We
clean that about every 2 weeks. Every thing works well between annual
cleanings with these protocols.

Paul



Paul R. Hazelton, PhD
Electron Microscope Unit
University of Manitoba
Department of Medical Microbiology
531 Basic Medical Sciences Building
730 William Avenue
Winnipeg, Manitoba, Canada, R3E 0W3
e-mail: paul_hazelton-at-umanitoba.ca
Phone:204-789-3313
Pager:204-931-9354
Cell:204-781-1502
Fax:204-789-3926


==============================Original Headers==============================
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From: hiller-at-anl.gov
Date: Tue, 9 Oct 2007 12:08:58 -0500
Subject: [Microscopy] Re: Wi-Fi and RF interference

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Hi

I fully understand your problem and respect the ideas passed on by others,
but have you tried running at one kV step higher. A higher kV will not
"cook" your sample so quickly and will be far less sensitive to
contamination on the apertures. I have many clients working in the
biological field, particularly with virus work, who routinely use
100/120/125kV, give it a try?

Two positive steps with just one change!

Steve Chapman
Senior Consultant Protrain
For electron microscopy consultancy and training world wide
Tel +44 1280 816512 Fax +44 1280 814007
Mobile +44 7711 606967 Web www.emcourses.com

----- Original Message -----
X-from: {paul_hazelton-at-umanitoba.ca}
To: {protrain-at-emcourses.com}
Sent: Tuesday, October 09, 2007 12:04 AM

This might be interesting for the people who use the Southbay single jet
electro polisher. I carry with me a Motorola i760 cell phone using the
Nextel/Sprint provider. I noticed that about 2 seconds before I
received an incoming call that the auto shutoff on the control unit
would activate shutting off the system. Typically this will happen when
the sensor detects a perforation in the sample. I confirmed that the
sample was not perforated and that the incoming call affected the
electronics in some way. Nestor and I did some simple experiments with
this and it seems the phone does not affect anything as long as it was
more than 2 feet away from the control unit. Also, this does not happen
with all phones. Nestor has an LG C2000 cell phone using AT&T and it
did not trigger the auto shutoff.

Jon





Jon M. Hiller
Electron Microscopy Center
Argonne National Laboratory
9700 South Cass Avenue
Building 212, Room A257
630-252-7904

dac-at-research.umass.edu wrote:
}
}
} ----------------------------------------------------------------------------
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}
} In response to this, I would just say that the comparison isn't exactly
} correct. PCs use digital logic (think thresholds, and designed-in noise
} immunity....) and thus will be much less susceptible to certain levels
} of RF interference while much critical business-end circuitry on TEMs is
} by it's nature analog and IF the circuits picked up RF signals it could
} cause interference... The FCC does have standards and assuming those
} standards are met there may still be problems, and one of the suggested
} solutions IF interference is observed is move the offending equipment
} away, or reorient, etc..
}
} I do not mean to suggest that the proliferation of wireless does
} actually cause problems.
}
} Dale
}
}
}
} beaurega-at-westol.com wrote:
} } ----------------------------------------------------------------------------
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} } ----------------------------------------------------------------------------
} }
} } Hi,
} }
} } Your EM column and the electronics are encased in metal parts and cabinets
} } that are grounded, I hope. A Faraday cage is a shield. Shielding is used
} } to contain or keep out electric fields and RF. So your EM is a nearly
} } perfect Faraday Shield, if properly grounded to the earth over a low
} } resistance path to a driven earth ground.
} }
} } The comments from John and Alan state that they don't see the problem. I
} } can see why.
} }
} } Here's a little paradox of sorts. How come a wireless RF transceiver right
} } next to your PC is not interferring with your PC but it does with your
} } grounded EM thirty feet away? The FCC and manufacturers are a few
} } shielding steps ahead of us. Even the inside surface of a plastic PC case
} } is metalized and grounded to reduce interference.
} }
} } JMO,
} }
} } Paul
} } Amateur Radio Station KC8O, extra class and commercial FCC license holder
} } for over thirty years.
} }
} } At 09:38 AM 10/8/07 -0500, you wrote:
} } }
} } } ----------------------------------------------------------------------------
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} } } ----------------------------------------------------------------------------
} } }
} } } Hi Everyone,
} } }
} } } Please correct me if I am wrong, but doesn't the FCC regulate the
} } } frequencies that may be used by different devices?
} } }
} } } Is it possible to shield your instruments, perhaps with a Faraday cage?
} } } A partial cage made of wire mesh stapled onto movable partitions (grounded
} } } together) - like the partitions that divide office space into cubicles might
} } } even do the job. One would need to know the minimum mesh size of hardware
} } } cloth needed to block that frequency.
} } }
} } } Take care, Bob Carter
} } }
} } } Lopez Island, WA
} } }
} } } ----- Original Message -----
} } } X-from: {oshel1pe-at-cmich.edu}
} } } To: {bob-at-rockisland.com}
} } } Sent: Friday, October 05, 2007 6:05 AM
} } } Subject: [Microscopy] Re: Wi-Fi and RF interference
} } }
} } }
} } } }
} } } }
} } ----------------------------------------------------------------------------
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} } ----------------------------------------------------------------------------
} } } } micromavens,
} } } }
} } } } Please reply to list -- I'm in the same boat, except the IT people
} } } } here don't care if they cause interference. They just chose 2.4 GHz
} } } } for the WiFi, and if that interfers with cordless phones, it's your
} } } } fault. Instruments? Not even a consideration to them.
} } } } $*#^&$(#&(.
} } } }
} } } } Phil
} } } }
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} } } } } Good Morning: The Institution has decided to push wireless internet
} } } } } access into every corner of the campus. They also intend to boost the
} } } } } RF (cell phone) signal strength. I operate 3 TEMs, a LEO EFTEM, a
} } } } } cryo-Tecnai and an CM10. I worry that the TEMs will be affected by the
} } } } } signal frequency and strength from these new sources. I am being asked
} } } } } specific questions about which frequencies are harmful to our
} } } } } operation and am
} } } } } having trouble answering. If anyone has any experience or resources to
} } } } } help me communicate the scope of the problem it would be much
} } } } } appreciated. Thanks bob harris
} } } } }
} } } } } Guelph Regional Integrated Imaging Facility (GRIIF)
} } } } } Transmission Electron Microscope Facility
} } } } } Dept. of Molecular and Cell Biology
} } } } } New Science Complex, 488 Gordon St.
} } } } } University of Guelph
} } } } } Guelph Ontario, Canada, N1G 2W1
} } } } } Phone: 519-824-4120 X 56409
} } } } } Fax: 519-837-1802
} } } } --
} } } } Philip Oshel
} } } } Microscopy Facility Supervisor
} } } } Biology Department
} } } } 024C Brooks Hall
} } } } Central Michigan University
} } } } Mt. Pleasant, MI 48859
} } } }
} } } } ==============================Original
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From: hoelyas-at-yahoo.com
Date: Tue, 9 Oct 2007 17:38:09 -0500
Subject: [Microscopy] [Filtered] AskAMicroscopist: Manual for "Zeiss EM900" TEM.

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (hoelyas-at-yahoo.com) from http://www.microscopy.com/Ask-A-Microscopist/Ask-A-Microscopist.html on Tuesday, October 9, 2007 at 15:30:28
---------------------------------------------------------------------------

Email: hoelyas-at-yahoo.com
Name: H.Elyas

Education: Graduate College

Location: City, State, Country

Question: Hi All
I need sevice manual or if not, schematic diagram of "Zeiss EM900" TEM. to repair my instrument please someone guid me what I have to do.
Best Regards, Elyas

---------------------------------------------------------------------------

==============================Original Headers==============================
6, 11 -- From zaluzec-at-ultra5.microscopy.com Tue Oct 9 17:38:08 2007
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6, 11 -- To: microscopy-at-microscopy.com
6, 11 -- From: hoelyas-at-yahoo.com (by way of Ask-A-Microscopist)
6, 11 -- Subject: [Filtered] AskAMicroscopist: Manual for "Zeiss EM900" TEM.
6, 11 -- Content-Type: text/plain; charset="us-ascii"
==============================End of - Headers==============================




From: scott.coutts-at-med.monash.edu.au
Date: Wed, 10 Oct 2007 00:40:27 -0500
Subject: [Microscopy] viaWWW: Immunogold reagents (protein A-gold, IgG-gold)

Contents Retrieved from Microscopy Listserver Archives
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This Question/Comment was submitted to the Microscopy Listserver
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Email: scott.coutts-at-med.monash.edu.au
Name: Scott Coutts

Organization: Monash University

Title-Subject: [Filtered] Immunogold reagents (protein A-gold, IgG-gold)

Question: Hi Everyone,

Can anyone make a recommendation for a gold label for immunolabelling? We don't want to conjugate our own gold. We'll be labelling whole cells and sections in LR white. The primary is polyclonal rabbit. Other than the species specificity issues, is there a general consensus on whether IgG or protein A is better for labelling? What about brands?

Cheers,

Scott.

Login Host: 130.194.13.102
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==============================Original Headers==============================
9, 11 -- From zaluzec-at-microscopy.com Wed Oct 10 00:40:27 2007
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9, 11 -- To: microscopy-at-microscopy.com
9, 11 -- From: scott.coutts-at-med.monash.edu.au (by way of MicroscopyListserver)
9, 11 -- Subject: viaWWW: Immunogold reagents (protein A-gold, IgG-gold)
9, 11 -- Content-Type: text/plain; charset="us-ascii"
==============================End of - Headers==============================




From: PavelLozovyy-at-Eaton.com
Date: Wed, 10 Oct 2007 07:18:50 -0500
Subject: [Microscopy] Electron microprobe analysis

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Does anyone have contact information to do electron microprobe analysis
in Cleveland area, Ohio?

Pavel Lozovyy
Supervisor

ATC Material Laboratories
Eaton Aerospace
23555 Euclid Avenue
Cleveland, OH 44117
Phone: 216-692-5479
Fax: 216-692-5816


==============================Original Headers==============================
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From: shive003-at-umn.edu
Date: Wed, 10 Oct 2007 08:19:38 -0500
Subject: [Microscopy] job opening

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

The University of Minnesota Veterinary Diagnostic Laboratory has an
Assistant Scientist position open in the Electron Microscopy Laboratory.
This position is a diagnostic, research, and supervisory role, and involves
both negative staining and resin-embedded tissue TEM.

Anyone interested in more information may contact me directly (email is
best).

Jan Shivers
Section Head - Electron Microscopy/Immunohistochemistry/Histology
Veterinary Diagnostic Laboratory
College of Veterinary Medicine
St. Paul, MN 55108
612-624-7297
shive003-at-umn.edu


==============================Original Headers==============================
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From: underwoo-at-u.washington.edu
Date: Wed, 10 Oct 2007 00:44:38 -0500
Subject: [Microscopy] viaWWW: Immunogold reagents (protein A-gold, IgG-gold)

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Scott,

For species specific gold conjugated secondaries against rabbit primaries we have used both BBI
international available through Ted Pella and Aurion avaliable through EMS (Electron Microscopy
Sciences) with excellent results in sizes from ultrasmall (Aurion, requiring enhancement) through 40nm.
Labelling frequency tends to go down as the size of gold increases. We have little experience with
protein A. Two things that I have noticed that have been helpful. 1) Use PBS rather than TBS for a buffer
as the TBS incompatibility with the antibody buffer will tend to cause clustering of the antibodies not
noticable at the light level. 2) We use only BSA not species specific serum like goat serum, for blocking.
The goat serum tends to be too good and the signal is reduced by a factor of ten for most of our
antibodies.

Robert Underwood
University of Washington
Dermatology Research Center
Seattle, WA


---------- Forwarded message ----------

This Question/Comment was submitted to the Microscopy Listserver
using the WWW based Form at http://microscopy.com/MicroscopyListserver/MLFormMail.html
---------------------------------------------------------------------------
Remember this posting is most likely not from a Subscriber, so when replying
please copy both scott.coutts-at-med.monash.edu.au as well as the MIcroscopy Listserver
---------------------------------------------------------------------------

Email: scott.coutts-at-med.monash.edu.au
Name: Scott Coutts

Organization: Monash University

Title-Subject: [Filtered] Immunogold reagents (protein A-gold, IgG-gold)

Question: Hi Everyone,

Can anyone make a recommendation for a gold label for immunolabelling? We don't want to conjugate
our own gold. We'll be labelling whole cells and sections in LR white. The primary is polyclonal rabbit.
Other than the species specificity issues, is there a general consensus on whether IgG or protein A is
better for labelling? What about brands?

Cheers,

Scott.

Login Host: 130.194.13.102
---------------------------------------------------------------------------

==============================Original
Headers==============================
9, 11 -- From zaluzec-at-microscopy.com Wed Oct 10 00:40:27 2007
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9, 11 -- From: scott.coutts-at-med.monash.edu.au (by way of MicroscopyListserver)
9, 11 -- Subject: viaWWW: Immunogold reagents (protein A-gold, IgG-gold)
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==============================Original Headers==============================
22, 22 -- From underwoo-at-u.washington.edu Wed Oct 10 10:55:19 2007
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From: dac-at-research.umass.edu
Date: Wed, 10 Oct 2007 11:01:28 -0500
Subject: [Microscopy] Practical expectations in elemental mapping?

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Hi All,

A researcher has brought an epoxy-embedded sample that had been treated
with 20nm zinc oxide particles. I sectioned the material and I see the
electron-dense particles and clusters dispersed in un-stained sections
by conventional TEM. The researcher wants to know if these dots are
indeed Zn. I have been reading websites and advertisments all morning
and I just can't easily find anything that states the limits of
detectivity (spatial) for elemental mapping/detection this type of
sample. I would greatly appreciate any information that I can pass on to
this researcher regarding how to proceed, what type of instrumentation
to be looking for, etc. Our facility has no analytical instrumentation
on any of our EMs and I haven't devoted much time keeping up with the
details of instruments we don't have for work we don't provide.

In a nutshell: Botanical material (root) with 20nm zinc oxide
particles/clusters, fixed and embedded in epoxy resin; particles may be
inside or outside of the root cells. Is it possible to get images and
elemental analysis/maps from these tiny particles?

Also, if there is an analytical service that can work with these
samples, please contact me.

Thanks,

Dale Callaham

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From: polychr-at-auth.gr
Date: Wed, 10 Oct 2007 14:46:59 -0500
Subject: [Microscopy] Winter School

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Dear List Members,

Electron Microscopy Laboratory of the Physics Department, Aristotle
University of Thessaloniki, Greece, is organizing the winter school

"Growth and characterization of advanced materials focused on
structural characterization"

from January 14th through 18th, 2008.

The school is addressed to PhD and postgraduate students. Apart from
the lectures, a hands-on training on specimen preparation techniques
will also be offered. For more information, please visit:
http://pam1.physics.auth.gr or contact the school coordinator, Prof.
E. K. Polychroniadis, at pam1-at-physics.auth.gr.


Best regards,
E.K. Polychroniadis



E.K. Polychroniadis
Department of Physics
Aristotle University of Thessaloniki
Thessaloniki 54124, Greece
Tel.: +30.2310.998163
Fax: +30.2310.998241
e-mail: polychr-at-auth.gr




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From: larry-at-cymru666.plus.com
Date: Wed, 10 Oct 2007 15:53:41 -0500
Subject: [Microscopy] Re: Practical expectations in elemental mapping?

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I would have said that this was relatively straightforward on any
'current' analytical TEM fitted with EDS.

Even without EDS, you can probably use electron diffraction to
confirm Zinc Oxide by d-spacings in ring diffraction patterns and
dark field imaging to show the distribution of particles.

In either case, you aren't easily going to be able to do much in the
way of quantification.

Best regards,
--
Larry Stoter

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From: kraftpiano-at-gmail.com
Date: Wed, 10 Oct 2007 21:00:55 -0500
Subject: [Microscopy] Specimen capture question.

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Ok. This question is a bit personal- I just found out that our puppy
has hook worms. Me being, well, me, I want to get as much info as
possible on these little things. Does anybody know how to capture
them so I can check them out under a light microscope? I've got some
protocols for staining and prep, but no idea how to actually get them.

I'd like to do an SEM scan of one of them as well, but I want to check
them out in light first.

I actually have a group of students who want to test a variety of
preventative measures on these worms, since we apparently have a
species that is immune to the Revolution medicine that my dog is on.

Sorry if this one seems a bit too personal and not technical, but I
figure someone out there on this list has had some experience with
getting these things.

--Justin A. Kraft

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From: marilena.re-at-brindisi.enea.it
Date: Thu, 11 Oct 2007 03:55:08 -0500
Subject: [Microscopy] Problem with a chiller ZEM 300 SW of a TEM TECNAI G2 F30

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Dear mail listers,
I work in the Centre ENEA in Brindisi with a Transmission Electron
Microscope TECNAI G2 F30 with a super Twin objective lens.. In these days we
have a problem with the cooling system of the instrument. It consists of
two chillers: ZEM 1000 S, which is the principal cooling system, and a ZEM
300 SW, a secondary chiller (useful for the objective lens) which works in
connection with the first one. The chiller ZEM 300 SW sometimes stops, the
temperature goes up with the consequent switching off of the objective lens;
when it works again (we have to change the setting of the thermostatic
valve), the temperature decreases very fast, but goes down too much (until
6 °C). In order to cause an increase of its temperature we have to modify
the water flow of the objecive lens in the valve unit of the TEM.
We suspect. that there is some problem with the thermostatic valve, but we
have never received the instruction manual of the chiller Zephyr ZEM 300 SW.
We need as soon as possible to solve this problem because it is not possible
to use the microscope and because the continuos changing of the water flow
of the objctive lens in the valve unit seems to cause also great variations
of the water flow in the other lenses of the column and in the diffusion
pump.
Have somebody else noticed something like this problem? Can someone help us?
We need also to find the user manual of the chiller ZEM 300 SW (Zephyr) or
of a similar water chiller, could please someone help me to find it ?
Attention: the chiller ZEM 300 SW works very different from the chiller
Zephyr ZEM 1000 S: for this one we already have the manual!
Any advice is welcome!! Thanks in advance
Marilena Re

Marilena Re
ENEA - Materials and Technology
Composite and Nanostructured Materials Section
C.R. Brindisi
S.S. 7 Appia - km 713,700
72100 - Brindisi Italy
marilena.re-at-brindisi.enea.it
tel +39-(0)831 201444
fax +39-(0)831 201581



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From: eschumacher-at-mccrone.com
Date: Thu, 11 Oct 2007 08:07:53 -0500
Subject: [Microscopy] Meeting Announcement: Midwest Microscopy and Microanalysis Society

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Greetings Colleagues,

The Midwest Microscopy and Microanalysis Society will hold its next
meeting, "Imaging at the Crossroads of Biological and Physical
Sciences", on Friday, October 19, 2007, at the University of Wisconsin
at Madison. The program and registration information can be found on
our website:

www.midwestmicroscopy.org

We look forward to seeing you in Madison.

Elaine Schumacher
President, Midwest Microscopy and Microanalysis Society


*********************************************************************
Elaine F.Schumacher
Senior Research Scientist
McCrone Associates, Inc.
850 Pasquinelli Drive
Westmont, IL 60559-5539 USA
630-887-7100 (tel)
630-887-7417 (fax)
E-mail: eschumacher-at-mccrone.com
Web Site: www.mccrone.com



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From: csd8-at-cornell.edu
Date: Fri, 12 Oct 2007 13:27:27 -0500
Subject: [Microscopy] viaWWW: xray analysis equipment on TEM

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Email: csd8-at-cornell.edu
Name: Carole Daugherty

Organization: Cornell University

Title-Subject: [Filtered] xray analysis equipment on TEM

Question: I am searching for a group that has a functioning xray analysis system on a TEM. I am at Cornell in Ithaca, NY so I would like to find a system close to Ithaca. I have sections ready for viewing and analysis.

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From: mbrown-at-aaechighschools.com
Date: Fri, 12 Oct 2007 15:51:41 -0500
Subject: [Microscopy] High voltage issues with Cambridge S200

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We have just had a Cambridge S200 Scanning electron microscope donated
to us by Motorola. (Actually 2 of them, one for spare parts).
I am having some issues getting it running. The relays inside the high
voltage power supply are not getting flipped, so the CRT does not light,
and the ion pump etc. is not getting power.
Any ideas where to start? I think I have connected all the interlocks.
Could this possibly be a vacuum leak problem? The roughing pump and
turbo pump both work but the column does not drop down beyond 10-6 Torr.


-Dr. Mike Brown
Science Dept Chair
AAEC_PV




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From: vladislav_speransky-at-nih.gov
Date: Fri, 12 Oct 2007 16:58:49 -0500
Subject: [Microscopy] Fwd: Re: Immunogold reagents (protein A-gold, IgG-gold)

Contents Retrieved from Microscopy Listserver Archives
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Hi Scott,

For something to start with, try 10 nm Protein A-gold. Protein A will
give you more precise localization compared to IgG-gold, because only
one PA can bind to the primary Ab molecule. Thus, each gold particle
you see will be pointing to a primary Ab. You really have to try one
day and compare both in parallel - you won't want to go back to IgG.

Other than that, Bob has made a couple of excellent points, really
worth stressing:
1) Size matters. There is a paper, if I am remembering right, by Rick
Giberson from Ted Pella, where they show how going from one size to
the next, the labeling density decreases almost in half. 5-6 nm is
often too small for screening extended areas, otherwise use the
smallest size you can see. (Ultrasmall is very convenient, because
you can benefit from high labeling density and then grow the label as
big as you need. Silver enhancement is actually very simple these
days, but still, for a first try with a rabbit primary, I would
definitely go with 5-10 nm PAG. Too bad there is no ultrasmall PAG.)
2) Do not overblock. You want to establish some binding first, then
deal with the background, if you have it.
Good controls really help :) An ideal control is cells that lack the
protein in question but are otherwise isogenic - any gold you see
over those is either background or cross-reactivity. Using an
unrelated rabbit polyclonal instead of your primary would be your
second best.

Brands - in the US, you can buy EM gold conjugates from a number of
suppliers, but they all will be made by either Aurion or BBI
International (I'll be glad to hear I'm wrong). There is also Jackson
Immunoresearch, excellent conjugates, but I am not sure if they
offer Protein A... All three are very reputable brands. I have had
good experience with Aurion's conjugates, while many of my colleagues
use BBI. You may or may not have the same choices in Australia, but
make sure to insist on chilled overnight shipping, especially with
Protein A.

Good luck,
Vlad
________________________________________________
Vlad Speransky, Staff Scientist
Supramolecular Structure and Function Resource
National Institute of Biomedical Imaging and Bioengineering, NIH
13 South Dr, Rm. 3N17 MSC 5766
Bethesda, MD 20892
301 496-3989
vladislav_speransky-at-nih.gov

Begin forwarded message:

} From: underwoo-at-u.washington.edu
} Date: October 10, 2007 11:56:52 AM EDT
} To: vladislav_speransky-at-nih.gov
} Subject: [Microscopy] Re: Immunogold reagents (protein A-gold, IgG-
} gold)
} Reply-To: underwoo-at-u.washington.edu
}
} ----------------------------------------------------------------------
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} The Microscopy ListServer -- CoSponsor: The Microscopy Society of
} America
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}
} Hi Scott,
}
} For species specific gold conjugated secondaries against rabbit
} primaries we have used both BBI
} international available through Ted Pella and Aurion avaliable
} through EMS (Electron Microscopy
} Sciences) with excellent results in sizes from ultrasmall (Aurion,
} requiring enhancement) through 40nm.
} Labelling frequency tends to go down as the size of gold increases.
} We have little experience with
} protein A. Two things that I have noticed that have been helpful.
} 1) Use PBS rather than TBS for a buffer
} as the TBS incompatibility with the antibody buffer will tend to
} cause clustering of the antibodies not
} noticable at the light level. 2) We use only BSA not species
} specific serum like goat serum, for blocking.
} The goat serum tends to be too good and the signal is reduced by a
} factor of ten for most of our
} antibodies.
}
} Robert Underwood
} University of Washington
} Dermatology Research Center
} Seattle, WA
}
}
} ---------- Forwarded message ----------
} Date: Wed, 10 Oct 2007 00:44:38 -0500
} X-from: scott.coutts-at-med.monash.edu.au
} To: underwoo-at-u.washington.edu
} Subject: [Microscopy] viaWWW: Immunogold reagents (protein A-gold,
} IgG-gold)
}
}
}
}
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} Email: scott.coutts-at-med.monash.edu.au
} Name: Scott Coutts
}
} Organization: Monash University
}
} Title-Subject: [Filtered] Immunogold reagents (protein A-gold, IgG-
} gold)
}
} Question: Hi Everyone,
}
} Can anyone make a recommendation for a gold label for
} immunolabelling? We don't want to conjugate
} our own gold. We'll be labelling whole cells and sections in LR
} white. The primary is polyclonal rabbit.
} Other than the species specificity issues, is there a general
} consensus on whether IgG or protein A is
} better for labelling? What about brands?
}
} Cheers,
}
} Scott.
}
} Login Host: 130.194.13.102
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} ==============================Original
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From: nicholls-at-uic.edu
Date: Mon, 15 Oct 2007 09:38:05 -0500
Subject: [Microscopy] Job Announcement - Chicago

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http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Position Opening at:

RESEARCH RESOURCES CENTER,
UNIVERSITY OF ILLINOIS AT CHICAGO

Microscopy Specialist/Research Specialist

The Electron Microscopy Service of the Research Resources Center (RRC) at
the University of Illinois at Chicago has an open position for a Microscopy
Specialist. The facility provides electron and laser microscopy and surface
analysis services for the university research community and external
organisations from two sites on the campus. The open position is in the
RRC-East facility, which specializes in physical and materials science
fields. The east side facility includes a JEOL JEM-3010 and JEOL JEM-100CX
TEMs, JEOL JEM-2010F and VG HB601 STEMs, Kratos AXIS-165 XPS and a Renishaw
Raman Spectrometer,.

The person we are looking for should have a bachelor's degree minimum and
preferably a master's degree or higher in physical sciences, engineering or
a related field, with more than one year's experience in laser and electron
microscopy. They will supervise the operation of the specimen preparation
area, including record keeping and maintenance and will assist/supervise in
the day to day running of the Electron Microscopes, Surface Analysis and
Raman. Interpersonal/ Communications skills are important, as this
individual will work with users, provide technical advice and demonstrate
how microscopy can advance their research.

Review of applications will commence immediately. For consideration,
interested parties should send an application letter, complete curriculum
vitae, and the names and addresses of three references to:

Alan W Nicholls, Ph.D. (nicholls-at-uic.edu)
Research Resources Center – East (m/c 337)
University of Illinois at Chicago
845 West Taylor Street.
Chicago, Illinois 60607-7058

Voice: (312) 996-1227
Fax: (312) 996-0539

UIC is an EEO/AA.



Alan W Nicholls, PhD
Director of Research Service Facility (Electron Microscopy)
Research Resources Center - East (M/C 337)
Room 110 Science and Engineering South Building
The University of Illinois at Chicago
845 West Taylor St
Chicago, IL 60607-7058

Tel: 312 996 1227
Fax: 312 996 8091
Office: Room 110

Web site www.rrc.uic.edu


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From: Konrad.Jarausch-at-hitachi-hta.com
Date: Mon, 15 Oct 2007 13:05:39 -0500
Subject: [Microscopy] Workshop on Cs Corrected STEM/EELS at BNL (Nov.7th + 8th)

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Greetings Colleagues/Listers -

-------------------------------------------------------------------
MEETING ANNOUNCEMENT:
Workshop on Advanced Electron Microscopy in Materials Physics
Date : November 7-8th, 2007
Location: CFN, Brookhaven National Laboratory (NY)
LINK: https://www.bnl.gov/aemworkshop/

DESCRIPTION:
The two-day workshop is structured to stimulate scientific exchanges and
explore new capabilities. Join your colleagues at BNL's world class
facilities for an exciting two days of invited talks, informal
discussions and technical exchanges. While the scientific themes of the
workshop are focused on aberration corrected STEM and EELS, other
advanced electron microscopy methods and materials physics applications
are also incorporated. Invited speakers include P. Batson, R. Borkowski
, N. Browning, M. Haider, A. Kirkland, B. Kabius, D. Muller, S.
Pennycook, H. Rose, M. Ruehle and R. Tromp.

There will be an opportunity check out the newly installed 200kV cold
field emission, probe-corrected, dedicated-STEM equipped with an
ultra-fast high resolution EELS, and tour the new Center for Functional
Nanomaterials!

TO ATTEND, please REGISTER ASAP: https://www.bnl.gov/aemworkshop/
(70 attendee limit, registration will be first-come first serve)
Note: 2-3 weeks advanced notice required for non-US citizens
(required to process visitor/guest registration)

Workshop Organizers:
Konrad Jarausch (Hitachi High Technologies America)
Yimei Zhu (Brookhaven National Laboratories)

----------------------------------------------------------------



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From: walck-at-southbaytech.com
Date: Mon, 15 Oct 2007 13:29:25 -0500
Subject: [Microscopy] Vacuum compatible Insulated wires -type and source

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Does anyone know the type of insulated wires typically used inside SEM
microscope chambers. Specifically, I am interested in knowing the type of
material used in the insulation so that it doesn't outgas. Brand name and
source would be a great plus.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com


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From: amgusman-at-ucdavis.edu
Date: Mon, 15 Oct 2007 14:07:11 -0500
Subject: [Microscopy] viaWWW: Philips CM-12 TEM

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Email: amgusman-at-ucdavis.edu
Name: Andrea Gusman

Title-Subject: [Filtered] Philips CM-12 TEM

Question: We currently have a Philips CM-12 TEM and the CRT screen on it is no longer working. We are looking at a replacement cost of $6,000.
Does anyone have any experience working with these type of monitors? Replacing them or hooking up a video monitor? Or does anyone have any suggestions?
Thank you.

Login Host: 169.237.230.153
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From: bigelow-at-umich.edu
Date: Mon, 15 Oct 2007 14:47:11 -0500
Subject: [Microscopy] RE: wires in vacuum

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I don't know specifically what manufacturers use in SEM vacuum
chambers; however, Radio Shack sell several sizes (26, 28, and 30
gauge, I think) of "wrapping wire' that I have used with good
results in vacuum applications. This is single-strand copper wire
that is coated with a tough, colored varnish (probably a Formvar
varnish) for insulation. I don't know the exact limits, but I
believe the insulation is good for up to 110 volts. It isn't very
expensive, so you might try a roll to see if it meets your needs
electrically. There should be no problem whatsoever insofar as
vacuum compatibility is concerned.
Wil
--
Wilbur C. Bigelow, Professor Emeritus
Materials Sci. & Engr., Univ. of Michigan
Ann Arbor, Michigan 48109-2136
e-mail: bigelow-at-umich.edu;
Fx:734-763-4788; Ph:734-975-0858
Address mail to: 2911 Whittier Court
Ann Arbor, MI 48104-6731

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From: pmoeck-at-pdx.edu
Date: Mon, 15 Oct 2007 18:43:25 -0500
Subject: [Microscopy] viaWWW: search for Postdoc Z-STEM/EELS

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Email: pmoeck-at-pdx.edu
Name: Peter Moeck

Organization: Portland State University

Title-Subject: [Filtered] search for Postdoc Z-STEM/EELS up to 3 years West coast based

Question: Postdoc, USA West-coast based, within a collaboration between Portland State University, the University of California at Davis, the Lawrence Livermore National Laboratory, the University of Washington at Seattle, and the Pacific North West National Laboratory.
Initially for one year at $35,500 (plus the usual approximately 50 % fringe benefits: health insurance, retirement benefits, etc.), available immediately, extendable up to 3 years by mutual agreement since funding is already secured !
A group of collaborators that are based at Portland State University, the University of California at Davis, and the University of Washington at Seattle is seeking a (male/female) postdoc for a project on Crystallographic and spectroscopic analyses of ferromagnetic semiconducting nanoparticle aggregates with Curie temperatures well above room temperature.
A background in materials physics, materials chemistry, crystallography, or materials science and engineering is required. Familiarity with Z-contrast (HAADF) imaging in scanning transmission electron microscopes and associated electron energy loss spectroscopy are essential. Skills in high resolution phase-contrast transmission electron microscopy, electron diffraction and crystallography, and crystallographic image processing will be appreciated.
Most of the work will actually be done in Prof. Nigel D. Browningís group at the University of California at Davis. Occasional travel to the other involved laboratories is expected.
The search will be open until the position has been filled. Applications (CV, list of referees, list of publications, etc.) should be sent to either or both of the following collaborators:
Prof. Peter Moeck
Department of Physics
Portland State University
P.O. Box 751
Portland, Oregon 97207-0751
Tel.: 503 725 4227, Fax: 503 725 2815, e-mail: pmoeck-at-pdx.edu
research group: Nanocrystallography Group and open-access crystallographic databases

and/or

Prof. Nigel D. Browning
Department of Chemical Engineering and Materials Science
University of California-Davis
One Shields Ave
Davis, CA 95616
Tel: 530-754-5358, Fax: 530-752-9554, e-mail: nbrowning-at-ucdavis.edu
research group: Interface Physics Group

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also to be checked out is this information on the overall project leader: Prof. Daniel R. Gamelin, his research group: Gamelin Research Group, and his groupís selected publications in the respective field


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From: susan.trant-at-viha.ca
Date: Mon, 15 Oct 2007 18:44:01 -0500
Subject: [Microscopy] viaWWW:35 mm Film for EM Microscope

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Email: susan.trant-at-viha.ca
Name: Susan Trant

Organization: Vancouver Island Health Authority

Title-Subject: [Filtered] Film for EM Microscope

Question: I have an older JOEL TEM that uses 35 mm film that comes in 500 m roll form. Does anyone out there know where I can purchase more? I have been experimenting with Ilford 35 mm black and white film, but have not been successful in coming up with the right exposure and film development times.

Sue Trant

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From: vray-at-partbeamsystech.com
Date: Mon, 15 Oct 2007 21:35:02 -0500
Subject: [Microscopy] RE: Vacuum compatible Insulated wires -type and source

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X-from plastic materials, commonly used as wire isolators, best vacuum
properties belong to Polyimide (or Kapton) - it can go to UHV and would
withstand long 200C bakeouts without any degradation. The drawback is that
polyimide wire is not very flexible and will not allow sharp bending; it is
also quite pricy.

Polyimide-isolated wire is available from Accuglass, wire and coax, other
vendors possible.

http://accuglassproducts[dot]com/home.php?cat=251

Second common isolator with excellent vacuum properties is Teflon (PTEE),
available form above, and many other vendors. Teflon wire would not take you
to 10E-10 Torr, but it works very well down to 10E-8, way more flexible then
Kapton and less expensive:

http://www.planetengineers[dot]com/default.asp?cat=Wire%2C+Teflon%26%23174%3
B+and+PTFE

Feel free to contact me offline if you need advice for some specific
application, or if you need to go to UHV below 10E-10 Torr.

I have no connection to the Accuglass or Planetengineers, other then being a
satisfied customer.

Cheers,
Valery
======================
Particle Beam Systems
& Technology





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Does anyone know the type of insulated wires typically used inside SEM
microscope chambers. Specifically, I am interested in knowing the type of
material used in the insulation so that it doesn't outgas. Brand name and
source would be a great plus.

-Scott

Scott D. Walck, Ph.D.
Technical Director
South Bay Technology, Inc.
1120 Via Callejon
San Clemente, CA 92673

US Toll Free: 1-800-728-2233
Tel: (949) 492-2600
Fax: (949) 492-1499

www.southbaytech.com
walck-at-southbaytech.com


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From: jacques.faerber-at-ipcms.u-strasbg.fr
Date: Tue, 16 Oct 2007 02:18:48 -0500
Subject: [Microscopy] Re: Vacuum compatible Insulated wires -type and source

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Scott,

2 possibilities come to mind.

1) Teflon insulated wire

2) non-insulated wire with ceramic beads, for extreme UHV and high T
bake-out.

One good source for (2) is www.omega.com , as well as usual vac. suppliers
( www.lesker.com , etc.)
Teflon wire is widely available, in great variety.

What specific vacuum, temperatures, current, voltage are you looking for?
Is flexibility required?

Vitaly Feingold
SIA
2773 Heath Lane
Duluth GA 30096
Ph. 770-232-7785
Fax 770-232-1791
www.sia-cam.com
----- Original Message -----
X-from: {walck-at-southbaytech.com}
To: {vitalylazar-at-att.net}
Sent: Monday, October 15, 2007 2:30 PM

In UHV applications, we have mostly used nude wires, insulated with
alumina tubes (single or multi bored) or beads. It's the best way to
know what one do. No organics and only stable materials.

For HV application and some UHV too, as other have mentionned, the
commonly used are silicon, teflon and kapton.

The kapton/polyimide kind is a better price/performences compromise,
with the main drawback that it catches water vapor and outgases then a
lot during the pumping down. We have some such home-made in-vacuum
Helmoltz coils, which need to be "baked" with a strong working current,
otherwise they slow down the pumping. It should not be an problem in HV,
as long as there isn't some length.

We tried once a ceramic coated wire, made by a German company
(www.detakta.de), which was fine but expensive and sitff. The polyimide
one came from the same manufacturer.


J. Faerber
IPCMS-GSI
(Institut de Physique et Chimie des Matériaux de Strasbourg
Groupe Surface et Interfaces)
23, rue de Loess ; BP43
67034 Strasbourg CEDEX 2
France

Tel 00 33(0)3 88 10 71 01
Fax 00 33(0)3 88 10 72 48
E-mail Jacques.Faerber-at-ipcms.u-strasbg.fr



walck-at-southbaytech.com a écrit :
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} Does anyone know the type of insulated wires typically used inside SEM
} microscope chambers. Specifically, I am interested in knowing the type of
} material used in the insulation so that it doesn't outgas. Brand name and
} source would be a great plus.
}
} -Scott
}
} Scott D. Walck, Ph.D.
} Technical Director
} South Bay Technology, Inc.
} 1120 Via Callejon
} San Clemente, CA 92673
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} US Toll Free: 1-800-728-2233
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From: k.levick-at-unsw.edu.au
Date: Tue, 16 Oct 2007 08:13:42 -0500
Subject: [Microscopy] viaWWW: TEM - film plates for Philips cm - series microscopes

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Email: k.levick-at-unsw.edu.au
Name: Katie Levick

Organization: Electron Microscope Unit, University of New South Wales

Title-Subject: [Filtered] TEM - film plates for Philips cm - series microscopes

Question: Hi everyone,

I am wondering if anyone has any film carrier plates that fit the Philips cm series microscopes which they would be willing to sell/give away? We use 3.25x4inch plate film.

Thanks,

Katie.


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From: Samuel.Connell-at-STJUDE.ORG
Date: Tue, 16 Oct 2007 10:20:45 -0500
Subject: [Microscopy] Imaging Scientist Position Available

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Imaging Scientist - St. Jude Children's Research Hospital.

Currently, St. Jude Children's Research Hospital has an opening for an
Imaging Scientist (Job Number 14556) in the Immunology Department.
The successful candidate would be responsible for managing an imaging
facility focused on interdisciplinary, multi-user microscopy. Experience
with advance microscopy techniques and methodologies, including live
cell imaging, FRET, FLIM, FRAP, FCS and TIRF is highly desired.

Requirements:
A Bachelor's degree in an appropriate scientific field plus a minimum of
ten (10) years (post-degree) of relevant and productive work experience
is required or,
A Master's degree in an appropriate scientific field plus a minimum of
nine (9) years (post-degree) of relevant and productive work experience
is required or,
A PhD in an appropriate scientific field plus five (5) years
(post-degree) of relevant and productive work experience is required.

To apply please visit our Web site www.stjude.org/jobs

St. Jude Children's Research Hospital is an Equal Opportunity Employer.


--
Samuel A. Connell
Director of Light Microscopy
Cell & Tissue Imaging Center
St. Jude Children's Research Hospital
332 North Lauderdale St., E7061
Memphis, TN 38105-2794
(901) 495-2536
samuel.connell-at-stjude.org





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From: Darkmatterfound-at-gmail.com
Date: Wed, 17 Oct 2007 08:32:16 -0500
Subject: [Microscopy] viaWWW: Staining starch samples

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Email: Darkmatterfound-at-gmail.com
Name: Victor Lo

Organization: ANSTO

Title-Subject: [Filtered] Staining samples

Question: Hi there!

Just wondering can provide me with any suggestion for staining starch for TEM sample? I have no back-ground for preparing biological samples ... so any suggestions, tricks and tips would be fantastic!!

Thanks mates!!!

Vic

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From: joef-at-the-mandp-lab.com
Date: Wed, 17 Oct 2007 08:33:01 -0500
Subject: [Microscopy] viaWWW: Glass Fibers Dispersing Samples

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Email: joef-at-the-mandp-lab.com
Name: Joe Foroughi

Organization: The M&P Lab

Title-Subject: [Filtered] Glass Fibers

Question: Is there an easy derivitization protocal to use for glass fibers to make them repel each other, so that they will be nicely distributed and not overlapping for image analysis? A paper from 1979 tells of an aqueous mixture of 0.25% methyl trimethoxysilane, 0.25% of a cationic lubricant called Softener-X (Cat-X) from Refined Onyx Corporation, and acetic acid to pH=4. I can't find any information on the cationic lubricant.

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From: edelmare-at-muohio.edu
Date: Wed, 17 Oct 2007 11:01:54 -0500
Subject: [Microscopy] Where to relocate an EM Facility

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I have to move my EM Facility somewhere else on campus because we
have out grown our existing location and environmental conditions
(Vibration, EMI, and Acoustic) are no longer compatible with EM´s.
The chosen site will be renovated for an EM Facility but the question
comes as to "Where"?

We have had site survey´s done on two potential locations. One
location was horrible (Problems out of spec for vibration, EMI-AC,
EMI-DC, and Acoustic). The second was poor (out of spec for EMI-AC
for 200 Kv TEM and high-end SEM, with distance issues for EMI-DC).
Since we are not going to build a new building just for EM
(unreasonable of my administration I know), where do I look for
physically compatible space? I would like to solicit comments,
discussion and suggestions for developing a search criteria for EM
Facility locations.

I am hoping that this criteria maybe of use for more than myself and
my facility, as I believe more and more of us will be facing similar
issues. "Normal" EM´s are moving into higher and higher
capabilities, i.e. 200 - 300 KV TEM´s and ultra low voltage FEG SEM´s
are becoming the new "standard", and the microscope environmental
specs are getting more and more stringent. Manufacturers do not seem
readily jumping to handle/correct/compensate in their engineering
designs to deal with these issues and the fact that the "standard"
microscope still needs to be installed within an existing research
building environment. Note: I am not addressing the ultra-highend
bleeding edge scopes (i.e. CS-corrected, monochomatic, FEG, count-the-
neutrons-in- the-atoms scopes) - yes, there will always be an in
house "support" price to pay for the bleeding edge. I am talking
about the fact that the "standard" microscope still needs to be
installed within an existing research building environment, and this
fact its seems is being ignored my the manufacturers. (Albeit: a
recent mailing from one manufacturer does somewhat acknowledge the
issues and states their new design does allow for "Reduced
installation requirements for acoustic and temperature variations" -
the easier environmental issues to correct for and is part of a multi-
million dollar scope). Third party add-on anti-vibration or EMI
cancellation systems are not going to be as good as something
inherently designed into the scope and does allow for the "Its not
our microscope that´s the problem its their EMI cancellation system"
kind of endless loops. Further more, due to cross-interference of
EMI cancellation systems, if you have more than one scope, the scopes
need to be space prohibitively far apart (20-25m spacing? Four? Five
EM´s?).

Criteria for consideration:

Obviously, there can be no hard and fast rules, and every site needs
to ultimately be tested, but the list of potential sites can be
reduced or prioritized.

If the options exist: Sandy soil is highly preferred. Clay soils are
not good. Are there other soil type considerations? (Wet or flood
prone areas are definitely not desired, eh?)

For acoustics and vibration: Older, underground (basements), stone,
cinder block, concrete building constructions are good. Interior
walls of same or wood studded drywall or plaster are good. New,
steel studded dry walls are not generally good - they offer little to
no support, often serve as vibration/acoustic resonators. (Is there
a EMI issue with Steel studs?)

Catch-22 Older maybe bad due to electro-magnetic interference (EMI)
issues, particularly old (and new) science buildings as they tend to
add additional electrical feeds every which way which causes EMI.
Science buildings seem to be bad because there are (albeit physical
sciences vs. math or cultural anthropology). Higher ceilings are
better (4-5 meters), as electrical and water supply lines which run
in the interstitial floor space can cause EMI problems but these drop
off quickly with, and the larger room air volume buffers air pressure
and temperature.

Wiring: We have to have it, but other than staying away from major
building power distribution / supplies waht needs to be considered?
And how far from major distributions is reasonable to look at?
Question: Twisted power feed cables are ideal, but are they critical?

Wi-fi has been discussed on the microscopy listserv and seems not to
be an issue provided you do not mounted the antenna´s on the column.

New Buildings: Built with General construction can be horrible for
EMI (lots of electrical supplies for all of 20th century equipment),
acoustic (ventilation and steel stud walls), vibrations (lighter
cheaper construction methods). BUT if planned for can be controlled
and eliminated (?) - however, you (the EM people) have to constantly
confirm that construction is being done to spec.

Elevators are not good near EM's, and near = 5 to 8m upto10 to15
meters minimum maybe? I am trying to find out. HOWEVER, there are
big problems with a basement level EM Facility which has no elevator
access. How do you get the scopes in? Or liquid nitrogen and
compressed gas cylinders? Are hydraulic or cable elevators better?
(One shaft vs counter weight).

Roads: Lighter the traffic in terms of numbers and vehicle mass is
better. Railroads

What have I gotten wrong? What have I ignored? What key factors
should be considered?

Campus Politics: Get and keep the biggest research guns and biggest
departments happy users, and make the Admin knows you do a good job
and keep as many as possible happy.

And so obviously the best location would be a concrete and brick
bunker underneath the Arizona desert with no other buildings within 1
kilometer served by a dirt mule path is the only way to go right?
Anybody have an old missile silo? Oh but then there´s all those
massive steel doors and springs . . .


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu



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From: David.Patton-at-uwe.ac.uk
Date: Wed, 17 Oct 2007 11:35:08 -0500
Subject: [Microscopy] Where to relocate an EM Facility

Contents Retrieved from Microscopy Listserver Archives
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At a recent meeting a manufacturer's rep said it took £500,000 (about $1,000,000) to get a room ready for their new top of the range TEM. I suggest we buy lottery tickets and get something like the FEI Titan which comes in a controlled box. Then you can put it anywhere, perhaps.

Dave



-----Original Message-----
X-from: edelmare-at-muohio.edu [mailto:edelmare-at-muohio.edu]
Sent: 17 October 2007 17:12
To: David Patton


I have to move my EM Facility somewhere else on campus because we
have out grown our existing location and environmental conditions
(Vibration, EMI, and Acoustic) are no longer compatible with EM´s.
The chosen site will be renovated for an EM Facility but the question
comes as to "Where"?

We have had site survey´s done on two potential locations. One
location was horrible (Problems out of spec for vibration, EMI-AC,
EMI-DC, and Acoustic). The second was poor (out of spec for EMI-AC
for 200 Kv TEM and high-end SEM, with distance issues for EMI-DC).
Since we are not going to build a new building just for EM
(unreasonable of my administration I know), where do I look for
physically compatible space? I would like to solicit comments,
discussion and suggestions for developing a search criteria for EM
Facility locations.

I am hoping that this criteria maybe of use for more than myself and
my facility, as I believe more and more of us will be facing similar
issues. "Normal" EM´s are moving into higher and higher
capabilities, i.e. 200 - 300 KV TEM´s and ultra low voltage FEG SEM´s
are becoming the new "standard", and the microscope environmental
specs are getting more and more stringent. Manufacturers do not seem
readily jumping to handle/correct/compensate in their engineering
designs to deal with these issues and the fact that the "standard"
microscope still needs to be installed within an existing research
building environment. Note: I am not addressing the ultra-highend
bleeding edge scopes (i.e. CS-corrected, monochomatic, FEG, count-the-
neutrons-in- the-atoms scopes) - yes, there will always be an in
house "support" price to pay for the bleeding edge. I am talking
about the fact that the "standard" microscope still needs to be
installed within an existing research building environment, and this
fact its seems is being ignored my the manufacturers. (Albeit: a
recent mailing from one manufacturer does somewhat acknowledge the
issues and states their new design does allow for "Reduced
installation requirements for acoustic and temperature variations" -
the easier environmental issues to correct for and is part of a multi-
million dollar scope). Third party add-on anti-vibration or EMI
cancellation systems are not going to be as good as something
inherently designed into the scope and does allow for the "Its not
our microscope that´s the problem its their EMI cancellation system"
kind of endless loops. Further more, due to cross-interference of
EMI cancellation systems, if you have more than one scope, the scopes
need to be space prohibitively far apart (20-25m spacing? Four? Five
EM´s?).

Criteria for consideration:

Obviously, there can be no hard and fast rules, and every site needs
to ultimately be tested, but the list of potential sites can be
reduced or prioritized.

If the options exist: Sandy soil is highly preferred. Clay soils are
not good. Are there other soil type considerations? (Wet or flood
prone areas are definitely not desired, eh?)

For acoustics and vibration: Older, underground (basements), stone,
cinder block, concrete building constructions are good. Interior
walls of same or wood studded drywall or plaster are good. New,
steel studded dry walls are not generally good - they offer little to
no support, often serve as vibration/acoustic resonators. (Is there
a EMI issue with Steel studs?)

Catch-22 Older maybe bad due to electro-magnetic interference (EMI)
issues, particularly old (and new) science buildings as they tend to
add additional electrical feeds every which way which causes EMI.
Science buildings seem to be bad because there are (albeit physical
sciences vs. math or cultural anthropology). Higher ceilings are
better (4-5 meters), as electrical and water supply lines which run
in the interstitial floor space can cause EMI problems but these drop
off quickly with, and the larger room air volume buffers air pressure
and temperature.

Wiring: We have to have it, but other than staying away from major
building power distribution / supplies waht needs to be considered?
And how far from major distributions is reasonable to look at?
Question: Twisted power feed cables are ideal, but are they critical?

Wi-fi has been discussed on the microscopy listserv and seems not to
be an issue provided you do not mounted the antenna´s on the column.

New Buildings: Built with General construction can be horrible for
EMI (lots of electrical supplies for all of 20th century equipment),
acoustic (ventilation and steel stud walls), vibrations (lighter
cheaper construction methods). BUT if planned for can be controlled
and eliminated (?) - however, you (the EM people) have to constantly
confirm that construction is being done to spec.

Elevators are not good near EM's, and near = 5 to 8m upto10 to15
meters minimum maybe? I am trying to find out. HOWEVER, there are
big problems with a basement level EM Facility which has no elevator
access. How do you get the scopes in? Or liquid nitrogen and
compressed gas cylinders? Are hydraulic or cable elevators better?
(One shaft vs counter weight).

Roads: Lighter the traffic in terms of numbers and vehicle mass is
better. Railroads

What have I gotten wrong? What have I ignored? What key factors
should be considered?

Campus Politics: Get and keep the biggest research guns and biggest
departments happy users, and make the Admin knows you do a good job
and keep as many as possible happy.

And so obviously the best location would be a concrete and brick
bunker underneath the Arizona desert with no other buildings within 1
kilometer served by a dirt mule path is the only way to go right?
Anybody have an old missile silo? Oh but then there´s all those
massive steel doors and springs . . .


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu



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From: tomw-at-uidaho.edu
Date: Wed, 17 Oct 2007 12:34:35 -0500
Subject: [Microscopy] Where to relocate an EM Facility

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Richard,

The UI is in the process of consolidating its 4 EMs into one facility so I am painfully aware of the difficulties involved. Our "move" has been 15 years in the making due to, essentially, institutional stupidity. The original facility space developed for the EM Lab (before my time) was a well laid out floor plan: individual bays for up to 5 scopes, large common sample-prep, darkroom, ultramicrotome lab space.....beautiful. All located on the 3rd floor of a steel-framed building-I will spare the gory details of how this happened. Obviously, the space was unusable for EM (any type). The idea of retrofitting each with after-market "fixes" was not a option ($$$) and wouldn't have worked well anyway. The other problem is what I call the "zero-sum space problem:" the UI rarely funds new building with state or private bonds therefore rarely builds new lab space. If you want a new lab someone has to give up that space so you better be good at politics.

My strategy was to locate as many possible space options (non of which were available at the time) and have them all surveyed (EMI, vibrations etc.) along with the 3rd Floor "evil space." The last was done to quell any "Why don't you just use this space" comments. By having site surveys in my pocket when a space did open up I could move quickly with some confidence that the space would work-Upper Administrators like momentum...once in motion it tends to remain in motion. Rooms were not perfect but there were no better alternatives.

Big Acquired Wisdom from this project is that retrofitting lab space is a BAD IDEA-unavoidable maybe........whatta ya gonna do??

Few humble suggestions:

-site survey as many potential sites as you have $$$ for (which you've done).
-in addition to basic electrical think about lighting. This seems trivial but we've found that the TEM space needs more controllable lighting (even with CCD cameras) than the SEM labs (obvious but then again, I'm slow) and retrofitting the overhead fluorescents is a pain. NOTE: we had no budget for large-scale renovations such as new walls etc. and even if you do there are problems with new walls in older building (air flow balance for one-see below).
-HVAC issues. AC vents, return vents etc. can be a real problem as they seem to always be blowing right on the column!
-noise. Some rooms seem quiet when being used as a simple chemistry lab but quite different when there are pumps, chillers, fans etc.

Simple stuff...but like I said, I'm slow. Good luck.

Tom



-----Original Message-----
X-from: edelmare-at-muohio.edu [mailto:edelmare-at-muohio.edu]
Sent: Wednesday, October 17, 2007 9:15 AM
To: Thomas Williams


I have to move my EM Facility somewhere else on campus because we
have out grown our existing location and environmental conditions
(Vibration, EMI, and Acoustic) are no longer compatible with EM´s.
The chosen site will be renovated for an EM Facility but the question
comes as to "Where"?

We have had site survey´s done on two potential locations. One
location was horrible (Problems out of spec for vibration, EMI-AC,
EMI-DC, and Acoustic). The second was poor (out of spec for EMI-AC
for 200 Kv TEM and high-end SEM, with distance issues for EMI-DC).
Since we are not going to build a new building just for EM
(unreasonable of my administration I know), where do I look for
physically compatible space? I would like to solicit comments,
discussion and suggestions for developing a search criteria for EM
Facility locations.

I am hoping that this criteria maybe of use for more than myself and
my facility, as I believe more and more of us will be facing similar
issues. "Normal" EM´s are moving into higher and higher
capabilities, i.e. 200 - 300 KV TEM´s and ultra low voltage FEG SEM´s
are becoming the new "standard", and the microscope environmental
specs are getting more and more stringent. Manufacturers do not seem
readily jumping to handle/correct/compensate in their engineering
designs to deal with these issues and the fact that the "standard"
microscope still needs to be installed within an existing research
building environment. Note: I am not addressing the ultra-highend
bleeding edge scopes (i.e. CS-corrected, monochomatic, FEG, count-the-
neutrons-in- the-atoms scopes) - yes, there will always be an in
house "support" price to pay for the bleeding edge. I am talking
about the fact that the "standard" microscope still needs to be
installed within an existing research building environment, and this
fact its seems is being ignored my the manufacturers. (Albeit: a
recent mailing from one manufacturer does somewhat acknowledge the
issues and states their new design does allow for "Reduced
installation requirements for acoustic and temperature variations" -
the easier environmental issues to correct for and is part of a multi-
million dollar scope). Third party add-on anti-vibration or EMI
cancellation systems are not going to be as good as something
inherently designed into the scope and does allow for the "Its not
our microscope that´s the problem its their EMI cancellation system"
kind of endless loops. Further more, due to cross-interference of
EMI cancellation systems, if you have more than one scope, the scopes
need to be space prohibitively far apart (20-25m spacing? Four? Five
EM´s?).

Criteria for consideration:

Obviously, there can be no hard and fast rules, and every site needs
to ultimately be tested, but the list of potential sites can be
reduced or prioritized.

If the options exist: Sandy soil is highly preferred. Clay soils are
not good. Are there other soil type considerations? (Wet or flood
prone areas are definitely not desired, eh?)

For acoustics and vibration: Older, underground (basements), stone,
cinder block, concrete building constructions are good. Interior
walls of same or wood studded drywall or plaster are good. New,
steel studded dry walls are not generally good - they offer little to
no support, often serve as vibration/acoustic resonators. (Is there
a EMI issue with Steel studs?)

Catch-22 Older maybe bad due to electro-magnetic interference (EMI)
issues, particularly old (and new) science buildings as they tend to
add additional electrical feeds every which way which causes EMI.
Science buildings seem to be bad because there are (albeit physical
sciences vs. math or cultural anthropology). Higher ceilings are
better (4-5 meters), as electrical and water supply lines which run
in the interstitial floor space can cause EMI problems but these drop
off quickly with, and the larger room air volume buffers air pressure
and temperature.

Wiring: We have to have it, but other than staying away from major
building power distribution / supplies waht needs to be considered?
And how far from major distributions is reasonable to look at?
Question: Twisted power feed cables are ideal, but are they critical?

Wi-fi has been discussed on the microscopy listserv and seems not to
be an issue provided you do not mounted the antenna´s on the column.

New Buildings: Built with General construction can be horrible for
EMI (lots of electrical supplies for all of 20th century equipment),
acoustic (ventilation and steel stud walls), vibrations (lighter
cheaper construction methods). BUT if planned for can be controlled
and eliminated (?) - however, you (the EM people) have to constantly
confirm that construction is being done to spec.

Elevators are not good near EM's, and near = 5 to 8m upto10 to15
meters minimum maybe? I am trying to find out. HOWEVER, there are
big problems with a basement level EM Facility which has no elevator
access. How do you get the scopes in? Or liquid nitrogen and
compressed gas cylinders? Are hydraulic or cable elevators better?
(One shaft vs counter weight).

Roads: Lighter the traffic in terms of numbers and vehicle mass is
better. Railroads

What have I gotten wrong? What have I ignored? What key factors
should be considered?

Campus Politics: Get and keep the biggest research guns and biggest
departments happy users, and make the Admin knows you do a good job
and keep as many as possible happy.

And so obviously the best location would be a concrete and brick
bunker underneath the Arizona desert with no other buildings within 1
kilometer served by a dirt mule path is the only way to go right?
Anybody have an old missile silo? Oh but then there´s all those
massive steel doors and springs . . .


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu



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From: edelmare-at-muohio.edu
Date: Wed, 17 Oct 2007 14:14:30 -0500
Subject: [Microscopy] Where to relocate an EM Facility

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Tom:

} "My strategy was to locate as many possible space options"

And THAT is the question - how do you pick the locations to test?

} "site survey as many potential sites as you have $$$ for"

Comes back to my question: How do "rank" list or limit the
locations you get tested? So you can best utilize the limited $$$?

I'm hoping we (the microscopy list community) can come up with a
best quess criteria for doing just this.




} My strategy was to locate as many possible space options (non of which
} were available at the time) and have them all surveyed (EMI,
} vibrations etc.) along with the 3rd Floor "evil space." The last was
} done to quell any "Why don't you just use this space" comments. By
} having site surveys in my pocket when a space did open up I could move
} quickly with some confidence that the space would work-Upper
} Administrators like momentum...once in motion it tends to remain in
} motion. Rooms were not perfect but there were no better alternatives.
}

Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu


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From: lcgould-at-med.cornell.edu
Date: Wed, 17 Oct 2007 15:56:05 -0500
Subject: [Microscopy] Microscopy: immuno EM cell monolayers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi All-
I have been asked to do immuno-EM on adherent cells. The PI also
provided pellets of the same cells, as controls for the Ab reaction:
the cells in the pellets are transfected with the Ag. The rub is
that what the PI is REALLY interested in is the interaction of the
adherent cells with B cells which have been added to the culture. He
is especially interested in looking for the Ag in the fine
pseudopod-like projections/connections that form between the 2 cell
types. Hence, the cells must remain as an intact monolayer.
I've had good luck with the pellets in LRWhite. What can I do about
the monolayers? Most of the immuno resins won't polymerize in the
presence of air/oxygen. I've tried making an Aclar sandwich, but
that was a mess. Should I try an Epon-like resin and then etch the
sections? I know that someone out there will have faced this in the
past....
--
Leona Cohen-Gould, M.S.
Sr. Staff Associate in Biochemistry and
Cell & Developmental Biology
Director, Electron Microscopy & Histology Core Facility
Manager, Optical Microscopy Core Facility
Weill Cornell Medical College

voice (212)746-6146
fax (212)746-8175
http://www.cornellcelldevbiology.org
http://www.cornellbiochem.org

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From: Elliott-at-arizona.edu
Date: Wed, 17 Oct 2007 18:18:22 -0500
Subject: [Microscopy] Re: Microscopy: immuno EM cell monolayers

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Leona
It is possible to flat embed your cells in the TC dish. All one
needs to do is exclude the air.
What I have done is to grow the cells in 35mm dishes. Fix and
dehydrate as normal. Fill the dish to over-full and then put the
cover on the dish upside-down. If you put the cover on so that one
side is down and then you angle the cover down into place (I am not
sure that makes sense, let me know if I have to try again) so that
there is no bubble under the cover.
I have also found that the LRWhite reacts with some TC dish plastic.
What has worked is to coat the inside of the TC dish and the top of
the cover with sterile, molten 1.5% agar and 0.5% gelatin. I put
some in the dish, swirl around until all surfaces are coated, pore
out the excess and let dry. The cells do not stick as well, but what
I have worked with have been fine.
Let me know if you want a formal protocol.
David


On Oct 17, 2007, at 1:59 PM, lcgould-at-med.cornell.edu wrote:

}
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}
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} Hi All-
} I have been asked to do immuno-EM on adherent cells. The PI also
} provided pellets of the same cells, as controls for the Ab reaction:
} the cells in the pellets are transfected with the Ag. The rub is
} that what the PI is REALLY interested in is the interaction of the
} adherent cells with B cells which have been added to the culture. He
} is especially interested in looking for the Ag in the fine
} pseudopod-like projections/connections that form between the 2 cell
} types. Hence, the cells must remain as an intact monolayer.
} I've had good luck with the pellets in LRWhite. What can I do about
} the monolayers? Most of the immuno resins won't polymerize in the
} presence of air/oxygen. I've tried making an Aclar sandwich, but
} that was a mess. Should I try an Epon-like resin and then etch the
} sections? I know that someone out there will have faced this in the
} past....
} --
} Leona Cohen-Gould, M.S.
} Sr. Staff Associate in Biochemistry and
} Cell & Developmental Biology
} Director, Electron Microscopy & Histology Core Facility
} Manager, Optical Microscopy Core Facility
} Weill Cornell Medical College
}
} voice (212)746-6146
} fax (212)746-8175
} http://www.cornellcelldevbiology.org
} http://www.cornellbiochem.org
}
} ==============================Original
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5, 22 -- From: David Elliott {Elliott-at-arizona.edu}
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5, 22 -- Date: Wed, 17 Oct 2007 16:17:59 -0700
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From: mandar.gadre-at-asu.edu
Date: Wed, 17 Oct 2007 18:38:55 -0500
Subject: [Microscopy] viaWWW: Looking for a used Critical Point Dryer (CPD) Unit

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Email: mandar.gadre-at-asu.edu
Name: Mandar Gadre

Organization: Arizona State University

Title-Subject: [Filtered] Looking for a used Critical Point Dryer (CPD) Unit

Question: Hello,

We are looking for a used Critical Point Dryer Unit. We would need the size of the chamber to be about 6-8 cm in length and 6-8 cm in inner diameter.
If you have a used one which you are willing to part with, we would like to work out a deal.

Looking forward to your reply.

Thanks and Regards,

Mandar Gadre
Graduate Student
Arizona State University.



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From: tina-at-pbrc.hawaii.edu
Date: Wed, 17 Oct 2007 20:29:59 -0500
Subject: [Microscopy] Replacing belt on Ultracut E

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Hi, All-

I need to replace a broken drive belt on a Reichert Ultracut E
ultramicrotome. I last did this, with advice and spare belts from a couple
of people in this Group, seven years ago. Well, the way my memory works
these days... I found the spare belts I ordered, but I sure can't remember
how to get the belt on! I did remember how to get into the thing, and I
remember there was some "trick" to getting the belt on around the drive
shaft. But I do not remember the "trick". Can anyone help me?

Mahalo! Tina

****************************************************************************
* Tina (Weatherby) Carvalho * tina-at-pbrc.hawaii.edu *
* Biological Electron Microscope Facility * (808) 956-6251 *
* University of Hawaii at Manoa * http://www.pbrc.hawaii.edu/bemf*
****************************************************************************


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From: thoward-at-unm.edu
Date: Wed, 17 Oct 2007 22:11:28 -0500
Subject: [Microscopy] Re: Microscopy: immuno EM cell monolayers

Contents Retrieved from Microscopy Listserver Archives
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Lee -

Someone else has already suggested doing the
polymerization in TC dishes; you can also do cells on
coverslips (glass or Thermanox) for flat embedding; the
blocks are easier (I think) to retrieve once polymerized,
plus you can get away from having to treat the polystyrene
dishes to "protect" them from being damaged by the resin.
I do resin infiltrations in glass coverslip "Coplin" jars
- I'm not sure of their real name, but they are *really*
short Coplin-like jars that hold 22 x 22 mm coverslips
instead of slides. Smaller coverslips can be done in glass
scintillation vials or regular old EM snap-cap vials. A
zillion ways to embed: old JB-4 style molds with a bit of
Saran wrap, Aclar film (since you already have that), or
other transparent cover work very well if you are doing UV
polymerization. I used to use the JB-4 chucks as covers
when I was doing thermal polymerization in these molds.
Another option - several companies sell molds that will
work for UV polymerization of coffin blocks if you can
work with cells grown on small Thermanox strips, & I know
of one company that may make slide-casting molds out of
UV-transparent stuff for you if you ask nicely :-) In a
pinch, I've used aluminum weighboats with Saran wrap sort
of floated on top for bigger samples/coverslips - this
uses a lot of resin, but it works. I also tried the Aclar
sandwich trick & was not thrilled with the mess that
resulted.

Good luck!

Tamara

On Wed, 17 Oct 2007 15:57:23 -0500
lcgould-at-med.cornell.edu wrote:
}
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} Hi All-
} I have been asked to do immuno-EM on adherent cells.
} The PI also
} provided pellets of the same cells, as controls for the
} Ab reaction:
} the cells in the pellets are transfected with the Ag.
} The rub is
} that what the PI is REALLY interested in is the
} interaction of the
} adherent cells with B cells which have been added to the
} culture. He
} is especially interested in looking for the Ag in the
} fine
} pseudopod-like projections/connections that form between
} the 2 cell
} types. Hence, the cells must remain as an intact
} monolayer.
} I've had good luck with the pellets in LRWhite. What
} can I do about
} the monolayers? Most of the immuno resins won't
} polymerize in the
} presence of air/oxygen. I've tried making an Aclar
} sandwich, but
} that was a mess. Should I try an Epon-like resin and
} then etch the
} sections? I know that someone out there will have faced
} this in the
} past....
} --
} Leona Cohen-Gould, M.S.
} Sr. Staff Associate in Biochemistry and
} Cell & Developmental Biology
} Director, Electron Microscopy & Histology Core Facility
} Manager, Optical Microscopy Core Facility
} Weill Cornell Medical College
}
} voice (212)746-6146
} fax (212)746-8175
} http://www.cornellcelldevbiology.org
} http://www.cornellbiochem.org
}
} ==============================Original
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***************************
Tamara Howard
Cell Biology & Physiology
UNM-HSC
Albuquerque, NM
***************************

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From: fleisher-at-gly.uga.edu
Date: Thu, 18 Oct 2007 08:02:33 -0500
Subject: [Microscopy] Looking for help repairing an EDS detector

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Hi All,

Our TN microspec EDS detector has lost vacuum. We're looking for
someone who can repair it or help us evaluate whether it's worth the
effort. If you know anyone who trouble shoots and repairs detectors
this old, please contact me off line. Thanks.

Chris

--
Chris Fleisher
Electron Microprobe Lab Coordinator
Department of Geology
University of Georgia
Athens, Ga. 30602
Ph: (706) 542-2419 E-mail: fleisher-at-gly.uga.edu


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From: edelmare-at-muohio.edu
Date: Thu, 18 Oct 2007 08:07:10 -0500
Subject: [Microscopy] Re: Where to relocate an EM Facility

Contents Retrieved from Microscopy Listserver Archives
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Ken:

Thanks for the input. Basement storage closet would be nice but I
really need more than one. And what I am finding is that science
buildings are NOT the way to go, as science folks like to stuff all
the noisey, hot, electrical things in the basement - because who
wants to live in the basement anyway?

(I look out my office window and I see a two story basement of a new
School of Business, and I'm sitting here wondering how do I get them
to give me space for "Science" there. Because I know no Business
faculty are going to use the basement area (but why is it two stories
tall? 22 feet below ground to the concrete pad?))

Thanks again.


On 18 Oct 2007 at 8:10, Kenneth Livi wrote:

} Richard,
} If I were looking around for space, I would look in basement
corners. These tend to have low vibration, low EM if away from
mechanical rooms and elevators. Maybe there is a store room that can
be converted? Of course, you have to invest in the room if you want
to give your scope the best chance to perform up to spec or better.
We sunk nearly $200k in a room for our CM 300 10 years ago. It was
well worth it knowing that we didn't have to fight the environment.
Metal studs, or anything that is metal is OK as long as it's not
moving. We had acoustic dampening curtains installed that helped cut
down the reflected sounds. The noisiest parts of our room are the
fans on the computer (we got that down to one) and GIF/EDS devices
and the SF6 exhaust (significantly loud enough that you notice it
when you turn it off even though the fan is 3 floors above us). The
piping, conduits and vents were all routed to the perimeter of the
ceiling to make room so the scope emission chamber could be raised.
Therefore, we built a "top hat" like ceiling with the center right up
to the concrete of the floor above us and the minimum drop ceiling to
cover the rest. The curtains were also used to send the A/C intake
flow to outside of the "room within a room" and have the cold air
flow along the floor and passively rise up with the hot air of the
the scope e-rack and computer rack (the two exhaust vents are
directly above these areas). We also installed a track of red
incandescent lights pointing at choice locations with a remote (long
cable) dimmer. The "mood" lighting is great for showing off the scope
to visitors. It looks like we really do something here!
} Ciao for now,
} Ken
}
} Kenneth Livi, Ph.D.
} High-Resolution Analytical Electron Microbeam Facility
} 3400 N Charles Street
} Department of Earth and Planetary Sciences
} Johns Hopkins University
} Baltimore, Maryland 21218 USA
}
}
}
}


Richard E. Edelmann, Ph.D.
Electron Microscopy Facility Director
364 Pearson Hall
Miami University, Oxford, OH 45056
Ph: 513.529.5712 Fax: 513.529.4243
E-mail: edelmare-at-muohio.edu
http://www.emf.muohio.edu


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From: drk-at-shcc.org
Date: Thu, 18 Oct 2007 09:45:17 -0500
Subject: [Microscopy] LR White embedding of cultures

Contents Retrieved from Microscopy Listserver Archives
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Hi,

I'm a little late in joining this discussion; please forgive me if this has already been mentioned. We also like thermanox round coverslips for growing cells since they do not react with any media or solvent that is generally used for EM. We embed them in wheaton snap caps, which are also impervious to embedding media and the smaller coverslips (aobut 11mm) fit well in them. If polymerization is to be done at 60C, a 1000 ml beaker of dry ice can be included in the polymerization oven to insure a co2 atmosphere in which the media will polymerize with no problems. I expect something similar could be done with UV polymerization, but I have not tried sincce we do this in a freeze-substitution apparatus under N2 atomoshpere.

Good luck,

Doug


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From: mdufraine-at-ebsciences.com
Date: Thu, 18 Oct 2007 10:12:33 -0500
Subject: [Microscopy] Re: viaWWW: Looking for a used Critical Point Dryer

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Mandar-

Energy Beam Sciences would be able to help you with a new model, as well
as used.

I will contact you off-line on this.

Mike Dufraine


mandar.gadre-at-asu.edu wrote:
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} We are looking for a used Critical Point Dryer Unit. We would need the size of the chamber to be about 6-8 cm in length and 6-8 cm in inner diameter.
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} ==============================Original Headers==============================
} 12, 11 -- From zaluzec-at-microscopy.com Wed Oct 17 18:38:55 2007
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--
Michael F. Dufraine
EM - Product Manager
TEL 800-992-9037 X340
MDufraine-at-ebsciences.com
www.ebsciences.com


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From: paul_hazelton-at-umanitoba.ca
Date: Thu, 18 Oct 2007 10:23:39 -0500
Subject: [Microscopy] Re: LR White embedding of cultures

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Doug, Leona, et al

As one who has to do flat embedding every once in a while - yes, I so
admit there is more to the world of viral EM than negative staining - I
have followed this line with interest. Unfortunately we do not see all
of the responses to Leona's quiery. I'm comfortable with how we do
things using routine, organic based resins. But LR White has been a
challenge over the years.

Doug, are you referring to the wheaton snap cap closures with the septa
or the snap cap glass vials. If you are using the septa caps - a neat
idea by the way - how are you covering the sample for LR White? Are you
filling them and using aclar, do y ou have another sealer?

Paul




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From: NWWhite-at-bwxt.com
Date: Thu, 18 Oct 2007 12:47:20 -0500
Subject: [Microscopy] RE: Looking for help repairing an EDS detector

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Hello Chris,

It was several years ago, but I Jim Nicolino satisfactorily rebuilt one
of my LN2 EDS detectors. No vested interest.
Latest web site I have:
http://advancedanalysistech.com/index2.html

Woody White
BWXT Services





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America

Hi All,

Our TN microspec EDS detector has lost vacuum. We're looking for
someone who can repair it or help us evaluate whether it's worth the
effort. If you know anyone who trouble shoots and repairs detectors
this old, please contact me off line. Thanks.

Chris

--
Chris Fleisher
Electron Microprobe Lab Coordinator
Department of Geology
University of Georgia
Athens, Ga. 30602
Ph: (706) 542-2419 E-mail: fleisher-at-gly.uga.edu


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From: p.ingram-at-voice.cellbio.duke.edu
Date: Thu, 18 Oct 2007 13:02:26 -0500
Subject: [Microscopy] Re: Looking for help repairing an EDS detector

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

} His name is Jim Nicolino - he specializes in detector repair and I
} personally can recommend him!

PulseTor/AAT
1816 St. Johns Bluff Road
Suite 305
Jacksonville, Florida 32246
904.646.3069
FAX 904.646.3131
JNicolino-at-comcast.net


Peter


} ----------------------------------------------------------------------------
}
} Hi All,
}
} Our TN microspec EDS detector has lost vacuum. We're looking for
} someone who can repair it or help us evaluate whether it's worth the
} effort. If you know anyone who trouble shoots and repairs detectors
} this old, please contact me off line. Thanks.
}
} Chris
}
} --
} Chris Fleisher
} Electron Microprobe Lab Coordinator
} Department of Geology
} University of Georgia
} Athens, Ga. 30602
} Ph: (706) 542-2419 E-mail: fleisher-at-gly.uga.edu


--
Peter Ingram
Sr. Physicist
Adj. Professor of Pathology,
Duke University Medical Center
Box 90319
LaSalle Street Extension
DURHAM NC USA 27708-0319

Tel: (919) 660-2695
Fax: (919) 660-2671
e-mail: p.ingram-at-cellbio.duke.edu
http://152.3.54.111/AEM_LAB.html

==============================Original Headers==============================
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From: cynthia.page-at-colorado.edu
Date: Thu, 18 Oct 2007 20:59:04 -0500
Subject: [Microscopy] viaWWW: Dumont Inox N5 Tweezers

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Email: cynthia.page-at-colorado.edu
Name: Cynthia Page

Organization: University of Colorado

Title-Subject: [Filtered] Dumont Inox N5 Tweezers

Question: Hi I am wondering if any one has a good source for Dumont Inox N5 self closing Tweezer. We buy them by the dozen and our last order contained 5 out of 12 tweezers with tips either bent, twisted or just too loose. I am so surprised to have this issue with these fine tweezers I would think they would inspect them before sending. Has anyone experienced this?

Thanks Cynthia

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From: cayala-at-lifespan.org
Date: Thu, 18 Oct 2007 20:59:25 -0500
Subject: [Microscopy] viaWWW: Re: Immuno EM cell monolayers

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Email: cayala-at-lifespan.org
Name: Carol Ayala

Organization: Rhode Island Hospital

Title-Subject: [Filtered] Re: Immuno EM cell monolayers

Question: Hello,

I thought Iíd add my two cents as well in regards to embedding adherent cells for immuno-EM.

I have found that cells grown specifically on Permanox plastic slides (Lab-Tek Chamber slides) can easily be embedded in LR White resin. Once the slide has been processed into LR White, it can be scored and broken into 2 pieces. I use aluminum weighing dishes as my embedding molds. (Low form, aluminum, fluted, weighing dish, approx.2 1/4" wide by 1/2" deep). Put approximately 10-12ml LR White into dish and place the half slide,- Cell Side Down!, on top of the liquid, it will float. Carefully place a second weigh dish down onto the surface of the resin. The second weigh dish should seat neatly inside the first dish (and is actually floating on the liquid). The meniscus of the liquid should rise up between the dishes and just be visible up at the lip. Place these in the oven for polymerization,. These overlapping dishes block out the air so there is no problem with polymerization. Next day carefully peel off aluminum dishes and, using a jewelers saw, cut right along the edges of the slide. I smooth the edges of the slide with sandpaper and score the interface between slide and resin. Then starting at the corners, lightly wedging a razor blade between the slide and resin you can easily separate the two layers. I have done this successfully many, many times.

Additionally I should mention that I have noticed a difference in the temperature at which LR White will polymerize. (And my oven is very stable). The most recent, very fresh supply I have is able to polymerize at 48 C. While tests in the past have shown that the lowest temp at which it would polymerize was 52 C. I donít know if this varies from lot to lot, or if it is a function of the freshness of the resin.

Best wishes,

Carol




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From: mike.net.mo-at-gmail.com
Date: Thu, 18 Oct 2007 21:00:02 -0500
Subject: [Microscopy] viaWWW: Fxm Need help on Confocal FV1000 with two-photon laser

Contents Retrieved from Microscopy Listserver Archives
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Email: mike.net.mo-at-gmail.com
Name: fanxiaoming

Title-Subject: [Filtered] Fxm Need help on Confocal FV1000 with two-photon laser

Question: We used two-photon laser as emission light source,but we only observe the image by DAPI staining(light wavelengh:710nm),when we increased the wavelengh and the light power of the two -photon laser we can't get the imgae by GFP stainning(light wavelengh: {910nm),I don't know which reason caused this problem,could you give me some advice ? Thanks!

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From: fara.sudlow-at-stjude.org
Date: Thu, 18 Oct 2007 21:11:45 -0500
Subject: [Microscopy] [Filtered] AskAMicroscopist: Software for particle size analysis

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This Question was submitted to Ask-A-Microscopist by (fara.sudlow-at-stjude.org)
from http://www.microscopy.org/Ask-A-Microscopist/Ask-A-Microscopist.html on Wednesday, October 17, 2007 at 13:40:20
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Email: fara.sudlow-at-stjude.org
Name: fara sudlow

Organization: SJCRH

Education: Undergraduate College

Location: Memphis, TN USA

Title: 2-D analysis software

Question: I was wondering if you had any recommendations for software that will perform some in-depth 2-D analysis. I am interested in free and licensed software and please include any pros and cons associated with each that you may know.

I am working for Sharon Frase at St. Jude Children's Research Hospital and we are researching different types of software applications that would fit our current needs and allow us to expand more in the future. The 2D analysis would include length, width, area, threshholding, particle counting... Any information that you might have on different programs as they relate to TEM would be much appreciated, like how do they deal with a large grayscale and are there parameters to determine what actually is a particle, etc. Also, if you have any ideas on 3D reconstruction, we would greatly appreciate that information as well.

Again, thank you in advance for your time.

Fara F. Sudlow


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From: camiller-at-anatomy.iupui.edu
Date: Fri, 19 Oct 2007 08:53:52 -0500
Subject: [Microscopy] viaWWW: Fall Meeting Indiana Microscopy Society

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Email: camiller-at-anatomy.iupui.edu
Name: Caroline Miller

Organization: Indiana Microscopy Society

Title-Subject: [Filtered] Fall Meeting

Question: The Indiana Microscopy Society is having a fall meeting and social on November 7, 2007 at the Clarian Pathology Laboratory Building, Indianapolis, IN from 4:00-8:00 PM. There is no charge for the meeting or dinner if a paid 2007-2008 member. We have two quest speakers, Tuli Mukhopadhyay, from IU, Bloomington, "How to Assemble a Virus:Microscopes Required (Cryo High Resolution EM) and James F. Leary from Purdue, "High Speed Interactive Molecular Imaging with Laser Opto-injection of Macromolecules and Cell Sorting" For more information check out the INMS website, www.indianamicroscopy.org


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From: NWWhite-at-bwxt.com
Date: Mon, 22 Oct 2007 13:58:29 -0500
Subject: [Microscopy] BSE Schematic?

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Email: steven.mcdaniel-at-ucr.edu
Name: Stephen McDaniel

Organization: UC Riverside

Title-Subject: [Filtered] EFFA Multiple Grid Staining Device

Question: Does anyone one on the list have experience with the EFFA Multiple Grid Staining Device? I haven't found any references
about its use.

} From the EMS website

"Simple and easy to use for most known EM staining techniques. Filtered, multiple step staining of up to 24 specimen grids in a carbon dioxide free environment. All plastic construction and it is resistant to all EM staining chemicals."

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From coordinatormartinprak-at-yahoo.de Mon Oct 22 13:37:58 2007
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Hello All,

I am looking for a copy of the circuit schematic for a GW Electronics
(BSE) "System 47".

I thought I had one long ago, but it is certainly not included in my
copy of the manual. I would really appreciate locating a copy that can
be scanned and emailed to me.


Thanks,

Woody White
BWXT Services
Lynchburg, VA
nwwhite-at-bwxt.com


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From: nizets2-at-yahoo.com
Date: Tue, 23 Oct 2007 02:51:02 -0500
Subject: [Microscopy] dirty Epon

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi all!

I would like to wake up the list (is it hibernating?) with the following issue.
I prepare Epon for 15 years and it was always clear, like a good old Johnnie Walker (and almost as toxic :-D).
Today, after I added BDMA and I carefully mixed as usual, I found it full of small dirt, like precipitates.
At the beginning I thought I mixed too strongly (sometimes I cannot control my strength ;-)) and these were small bubbles so I let it calm down, but to no avail. These are definitely NOT small bubbles.
It never happened before and I wonder what I should do.

- Do somebody have had this problem before?
- Can I use this mixture?
- What went wrong? There is no expiry date on none of the products but they are not older than y few years (stored at RT). I am afraid that, if I prepare it again with the same products, I will get the same result.

Best regards,
Stephane

__________________________________________________
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From: pjm-at-gol.com
Date: Tue, 23 Oct 2007 06:31:09 -0500
Subject: [Microscopy] Advice needed for using Hitachi TM-1000 desktop SEM

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Dear List,

Recently I started using a new Hitachi TM-1000 desktop SEM.

It is wonderfully easy to use - taking about 5 minutes to switch on, load
samples and start running.

My impression is that this SEM uses a relatively low energy electron beam
that offers:

(i) relatively low-resolution (good to around 1,000 to 2,000 x
magnification, which is enough for many purposes),

(ii) very quick sample inspection (for macro-materials such as seeds,
other plant parts, insects, and so on),

(iii) no need for cooling, a high vacuum, and carbon or other coating of
samples.

With this kind of set up, what are the likely problems that new users
should be alert to?

I do not have any other experience of SEM, apart from a brief period of
undergraduate training with a 1980s era, high-resolution, liquid
nitrogen-cooled SEM (used for thin-section, freeze-fracture, and
ultrastructure studies).

The instruction book tells us to avoid sticky fluids that will attach to
the detector and destroy it. Does this mean we cannot use a ballpoint
pen to mark areas of the tape with ink? Can we use an alcohol-based ink
(e.g. marker pen) for this purpose?

What kind of tape is best to use on stubs to hold samples?

The microscopy tapes we have are either too strong and leave a mess of
adhesive on the stub, or produce a grainy background that makes it
difficult to distinguish the fine feathery structures on the foot of a
small insect.

What kinds of sample treatments can be recommended for an SEM machine of
this sort?

It seems that smaller samples (i.e. pollen) quickly develop a fuzzy halo
which obscures detail - this may be an effect of electric charge
building up (I guess). Or is it a result of working at the limit of the
working distance of the electron focusing system?

What elementary or other textbooks on (low-resolution) SEM can be
recommended?

Are the kinds of questions I am asking already answered in such books?

Peter Matthews

(Ethnobotany & Prehistory, National Museum of Ethnology, Osaka, Japan).



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From: donovan.leonard-at-gmail.com
Date: Tue, 23 Oct 2007 08:35:35 -0500
Subject: [Microscopy] Re: Advice needed for using Hitachi TM-1000 desktop SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Hi Peter,

You are correct, the TM-1000 is wonderfully easy to use! I'd like
to add it was high schooler tested and approved! Over the past summer
I had the opportunity to introduce high school students to SEM with
the TM-1000 in the classroom. Over 70 students got hands on time with
the TM-1000 and the feedback was it was fun, exciting and a "window to
another world"!!!!

The TM-1000 utilizes a tungsten filament source operated at 15kV to
obtain a resolution of ~30nm (from what I remember) and magnifications
up to 10,000X. There is a solid state backscattered electron detector
and a charge up reduction mode which reduces sample charging for
insulating samples. All of these specs made imaging beef jerky, nail
polish, coffee beans, peanuts, broccoli, a pencil eraser and whatever
else the students chose really simple.

We experienced no problems with the TM-1000 over the entire term of
the course. Just make sure the sample height does not exceed the
maximum height on the height gauge and you will not have to worry
about getting sticky fluids on the pole piece or detector. (If you
open the specimen chamber door and crouch down and peak up into the
sample chamber you can see the four-quadrant electron detector at the
bottom of the pole piece, this is what you have to be careful not to
damage!) So mark away with the ball point pen.

As for tapes....wee just used standard double sided carbon tape and
quarters, nickles and pennies as the sample pucks. I guess you could
try a 3M double sided tape which is easier to remove than the carbon
tape. Although, a little acetone gets any adhesive off relatively
easily.

The fuzzy halo you mention......it may be you do not have the
TM-1000 in the charge-up reduction mode which is found in one of the
drop down menus. Any sample treatments you perform on standard SEM
samples are fair game for the TM-1000, but make your life simple,
don't chance a heavy gold coating or laborious critical point drying.
Just stick it on the stub and image.

Well, I can go on about how much fun students had with the TM-1000
but I have to get some work done. If you'd like to see the over 400
micrographs the students acquired during the course from magnification
of 50X - 10,000X of a variety of samples then visit

http://s190.photobucket.com/albums/z206/duketipnano/

and if you want to see presentations the students created from the
micrograph data visit

http://duketip.nano2.googlepages.com

Hope some of this info helps. Good luck with the TM-1000.

As a disclaimer I do not work for or sell the TM-1000, just a
microscopist who had a really great time allowing students to discover
the micro and nano-scale with this SEM. Every high school should have
a TM-1000. Or at least we should load up a few RVs with 2-3 of them
and tour different schools introducing students of all ages to not
only microscopy but science and technology!

Donovan

Donovan N. Leonard
Visiting Research Assistant Professor
Dept. Physics & Astronomy
Appalachian State University
231 CAP Building
525 Rivers St.
Boone, NC 28608

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From: gary.m.brown-at-exxonmobil.com
Date: Tue, 23 Oct 2007 09:36:55 -0500
Subject: [Microscopy] Re: dirty Epon

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Stephane,

I have seen precipitation of something (???) from Epo-Fix after several
years shelf-life. Threw it away and purchased new batch. If you care at
all about your sample, never compromise quality with any suspicious
preparation materials.

I am sure that if Chuck Garber were around, he would tell us all exactly
what the precipitating component is.

Regards,

Gary M. Brown
Microscopy Specialist
ExxonMobil Chemical Company
Baytown Technology & Engineering - West
5200 Bayway Drive
Baytown, Texas 77520-2101
phone: 281 834 2387
fax: 281 834 2395
e-mail: Gary.M.Brown-at-ExxonMobil.com

"Happiness equals reality minus expectations." Tom Magliozzi





nizets2-at-yahoo.
com
To
gary.m.brown-at-exxonmobil.com
10/23/07 02:53 cc
AM
Subject
[Microscopy] dirty Epon
Please respond
to
nizets2-at-yahoo.
com











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Hi all!

I would like to wake up the list (is it hibernating?) with the following
issue.
I prepare Epon for 15 years and it was always clear, like a good old
Johnnie Walker (and almost as toxic :-D).
Today, after I added BDMA and I carefully mixed as usual, I found it full
of small dirt, like precipitates.
At the beginning I thought I mixed too strongly (sometimes I cannot control
my strength ;-)) and these were small bubbles so I let it calm down, but to
no avail. These are definitely NOT small bubbles.
It never happened before and I wonder what I should do.

- Do somebody have had this problem before?
- Can I use this mixture?
- What went wrong? There is no expiry date on none of the products but they
are not older than y few years (stored at RT). I am afraid that, if I
prepare it again with the same products, I will get the same result.

Best regards,
Stephane

__________________________________________________
Do You Yahoo!?
Tired of spam? Yahoo! Mail has the best spam protection around
http://mail.yahoo.com


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31, 19 -- From gary.m.brown-at-exxonmobil.com Tue Oct 23 09:36:53 2007
31, 19 -- Received: from hoespc01.exxonmobil.com (hoespc01.exxonmobil.com [158.35.223.1])
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From: terry-at-AsylumResearch.com
Date: Tue, 23 Oct 2007 15:46:45 -0500
Subject: [Microscopy] Job Openings- AFM Technical Representatives-Asylum Research

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

AFM Technical Sales Representatives-US and UK
Asylum Research has openings available for Technical Sales
Representatives in the United States and in our Oxford, UK office.
The candidates should have knowledge of AFM, instrumentation, and
application experience in the areas of physics, electrical
measurements, material science, polymers, and/or bioscience, or
similar scientific instrumentation experience. The individuals will
be responsible for all sales activities including generating new
leads and lead follow-up, attending trade shows, customer quotations,
technical presentations, product demonstrations, as well as customer
application support. There will be frequent interface with sales/
marketing and application scientists. Must have excellent
communications skills, both written and oral. There will be frequent
travel.

To apply for a position, please send your resume in a PDF file to
jobs-at-AsylumResearch.com and indicate the job position in the subject
line. You may also fax it to 805-696-6444. Please also include a
cover letter, resume and salary requirements. Additional information
can be found at
http://www.asylumresearch.com/About/About.shtml#CR

Terry Mehr

Asylum Research

==============================Original Headers==============================
4, 13 -- From terry-at-AsylumResearch.com Tue Oct 23 15:46:45 2007
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4, 13 -- From: Terry Mehr {terry-at-AsylumResearch.com}
4, 13 -- Subject: Job Openings- AFM Technical Representatives-Asylum Research
4, 13 -- Date: Tue, 23 Oct 2007 13:46:37 -0700
4, 13 -- X-Mailer: Apple Mail (2.752.2)
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From: kraftpiano-at-gmail.com
Date: Tue, 23 Oct 2007 21:35:37 -0500
Subject: [Microscopy] Re: Advice needed for using Hitachi TM-1000 desktop SEM

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I recently saw this instrument at the M&M conference in Ft. Lauderdale, FL.
I was impressed by it, much more so than I was by the FEI Phenom. In
particular, since I am a high school teacher, I challenged the sales
person. Since I deal with students that will go out and find whatever they
want (And you'd be surprised what they find! One student handed me a booger
on a slide once and wanted to look at it under a light microscope!)

I happened to be eating my lunch at the time of my demo, which consisted of
a burger and fries. Expecting a sample-prep nightmare, I offered a french
fry from my plate, which the sales rep quickly broke off, placed on a stub,
inserted it into the microscope, and viewed it. It wasn't one of those dry,
crusty ones, either. It was a hot, oily, wet fry.

I was amazed at the imaging capabilities on such a bad specimen.

My take on it, though, is that Hitachi Canada has the better accessories for
it. They have a motorized stage control as well as a nicer EDS unit that
attaches to it. They also have a switchbox which overcomes my one complaint
about the instrument- the lack of ability to switch from topo to compo mode
on the BSE detector.

All in all, my impression (Given what I saw, as well as the stories I heard
from using it in middle- and high-schools for demos) was that it is a very
versatile instrument that would be hard to break.

Don't take this as a warranty, though! Inspect your boogers at your own
risk!

--Justin A. Kraft
Leadership Academy West
West Palm Beach, FL

==============================Original Headers==============================
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7, 31 -- To: pjm-at-gol.com, microscopy-at-microscopy.com
7, 31 -- Subject: Re: [Microscopy] Advice needed for using Hitachi TM-1000 desktop SEM
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==============================End of - Headers==============================




From: ncoombs-at-chem.utoronto.ca
Date: Wed, 24 Oct 2007 22:13:10 -0500
Subject: [Microscopy] viaWWW: Differential Polymer Staining

Contents Retrieved from Microscopy Listserver Archives
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Email: ncoombs-at-chem.utoronto.ca
Name: Neil Coombs

Organization: Centre for Nanostructure Imaging, University of Toronto

Title-Subject: [Filtered] Differential Polymer Staining

Question: One of our graduate students is working on a block
copolymer system (NIPAM/PDMA). The polymers are relatively similar
in structure, however they differ in that one contains a secondary
amine and the other a tertiary amine. We are looking for a heavy
metal stain (and/or staining conditions/protocols) that is likely to
preferentially attach to one of these groups. Any help would be
appreciated!

Dr. N. Coombs
Centre for Nanostructure Imaging
Dept. of Chemistry, University of Toronto

Login Host: 74.14.40.160
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==============================Original Headers==============================
7, 11 -- From zaluzec-at-microscopy.com Wed Oct 24 22:13:10 2007
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7, 11 -- From: ncoombs-at-chem.utoronto.ca (by way of MicroscopyListserver)
7, 11 -- Subject: viaWWW: Differential Polymer Staining
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From: donc-at-asmicro.com
Date: Thu, 25 Oct 2007 09:43:36 -0500
Subject: [Microscopy] Re: Differential Polymer Staining

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Neil Coombs asked about selective staining of block copolymers, in order to
image their nanostructure. I don't have an answer to the chemical question
but instead suggest trying AFM phase imaging instead of TEM. Atomic Force
Microscopy has been very successful in getting image contrast between
different polymer domains without staining. The mechanical interaction of
the AFM probe with the sample surface senses local differences in stiffness
and/or adhesion in order to create contrast. The AFM can scan as-produced
exterior surfaces of test samples and on ultramicrotomed blocks in order to
see inside the bulk. There is no need to create a good thin section, just a
smooth block face.
Examples of phase images can be found at:
www.asmicro.com/Applications/phase.htm



Disclaimers: My company provides AFM analysis services, training and
consulting, and we buy and sell used AFMs that often include phase
capability.



Historical background: I was the first person outside Digital Instruments
to make a AFM phase image while tapping on the surface (11/1994). For about
a year after that, I was the only person in the world promoting phase
imaging as a technique for material analysis. I still get a kick from
telling people to try it.



regards,
Don
=============================================
Don Chernoff, Ph.D., President
Advanced Surface Microscopy, Inc. E-Mail: donc-at-asmicro.com
3250 N. Post Rd., Ste. 120 Voice: 317-895-5630
INDIANAPOLIS IN 46226 USA Toll free: 800-374-8557 (in USA & Canada)
web: http://www.asmicro.com Fax: 317-895-5652
[business activities: analytical services in AFM, AFM probes, consulting,
training,
calibration and test specimens, calibration and measurement software,
used NanoScope equipment.]
=============================================



----- Original Message -----
From: ncoombs-at-chem.utoronto.ca
To: donc-at-asmicro.com
Sent: Wednesday, October 24, 2007 11:23 PM
Subject: [a] [Microscopy] viaWWW: Differential Polymer Staining





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Email: ncoombs-at-chem.utoronto.ca
Name: Neil Coombs

Organization: Centre for Nanostructure Imaging, University of Toronto

Title-Subject: [Filtered] Differential Polymer Staining

Question: One of our graduate students is working on a block
copolymer system (NIPAM/PDMA). The polymers are relatively similar
in structure, however they differ in that one contains a secondary
amine and the other a tertiary amine. We are looking for a heavy
metal stain (and/or staining conditions/protocols) that is likely to
preferentially attach to one of these groups. Any help would be
appreciated!

Dr. N. Coombs
Centre for Nanostructure Imaging
Dept. of Chemistry, University of Toronto

Login Host: 74.14.40.160
---------------------------------------------------------------------------

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Headers==============================
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7, 11 -- From: ncoombs-at-chem.utoronto.ca (by way of MicroscopyListserver)
7, 11 -- Subject: viaWWW: Differential Polymer Staining
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==============================Original Headers==============================
27, 24 -- From donc-at-asmicro.com Thu Oct 25 09:43:36 2007
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From: r.carzaniga-at-imperial.ac.uk
Date: Thu, 25 Oct 2007 11:18:11 -0500
Subject: [Microscopy] TEM/position available-Electron Microscopy Technician-London-UK

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html


Electron Microscopy Technician
Salary: £24,570 - £28,060 per annum

http://www.nature.com/naturejobs/science/jobs/29113


A position is available immediately for a trained individual to join the Electron Microscopy Centre at Imperial College, South Kensington Campus, LONDON (UK).

The newly-created Centre has state-of-the-art infrastructure and a wide range of techniques for visualisation of biological structures from macromolecules to cellular organisation. You will have a biological or technical degree, experience in cell biology research environment, as well as in specimen preparation techniques for Transmission Electron Microscopy and the ability to perform ultra-thin sectioning. You will be able to communicate on specialised technical issues, have good analytical and problem solving skills and be computer literate. In addition you will have excellent communication skills, the ability to be precise and meticulous with strong attention to detail and the ability to exercise your initiative to work independently and as part of a team. You will be expected to perform some routine EM for Imperial research groups and provide training to new users.

The position offers opportunities for participating in research projects, methods development and learning techniques such as Electron Tomography and high resolution EM.

A job description and person specification can be obtained from the following link:

https://www.imperial.ac.uk/employment

Further details can be obtained from Dr Raffaella Carzaniga on r.carzaniga-at-imperial.ac.uk


Closing date: 19 November 2007.


==============================Original Headers==============================
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From: zaluzec-at-ultra5.microscopy.com
Date: Thu, 25 Oct 2007 21:23:39 -0500
Subject: [Microscopy] AskAMicroscopist : softwares for crystal structure anlysis

Contents Retrieved from Microscopy Listserver Archives
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} Date: Thu, 25 Oct 2007 13:48:51 -0500
} To: Zaluzec-at-MSA.MICROSCOPY.COM
} From: sun1grass-at-yahoo.com ()
} Subject: [Filtered] AskAMicroscopist: softwares for crystal structure anlysis
}
} Below is the result of your feedback form (NJZFM-ultra-55). It was submitted by (sun1grass-at-yahoo.com) from http://microscopy.com/Ask-A-Microscopist/Ask-A-Microscopist.html on Thursday, October 25, 2007 at 13:48:51
} ---------------------------------------------------------------------------
}
} Email: sun1grass-at-yahoo.com
} Name: Fengli Wang
}
} Organization: Colorado School of Mines
}
} Education: Graduate College
}
} Location: golden, CO
}
} Question: Hi,
}
} Can anybody recommend some good softwares for crystal structure anlysis? Where can I get pcpwin? Thank you very much.
}
} Sincerely,
} Fengli
}
}
} ---------------------------------------------------------------------------
}

==============================Original Headers==============================
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From: wlehman-at-bu.edu
Date: Thu, 25 Oct 2007 21:30:09 -0500
Subject: [Microscopy] viaWWW: Senior Electron Microscopy Technician

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Email: wlehman-at-bu.edu
Name: Tori Hatch

Organization: Boston University

Title-Subject: [Filtered] position available

Question:
POSITION AVAILABLE
Senior Electron Microscopy Technician

A Senior Electron Microscopy Technician is sought to perform duties in support of research work on the structure of actin filament complexes that (1) are associated with cardiac and skeletal muscle regulatory proteins to control muscle activity and (2) interact with smooth muscle actin-binding proteins to modulate the assembly of the smooth muscle cytoskeleton. Applicants must have experience in high-resolution EM work and first-rate facility with computer-assisted image analysis. The candidate should have a Bachelorís degree and several years of experience. Prior familiarity with preserving and recording macromolecular assemblies in negative stain and by cryo-EM methods would be invaluable. Experience in supervising graduate students and post-doctoral fellows would also be important.

Interested applicants should send their CV with three references to:

Dr. William Lehman
Professor of Physiology & Biophysics
Department of Physiology & Biophysics
Boston University School of Medicine
715 Albany Street
Boston, MA 02118

Or email:

wlehman-at-bu.edu

Dr. Lehmanís research program is summarized on his home page:

http://biophysics.bumc.bu.edu/faculty/lehman/index.html



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From: DLowry-at-asu.edu
Date: Thu, 25 Oct 2007 21:30:37 -0500
Subject: [Microscopy] viaWWW: part for Reichert Ultracut-E microtome

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Email: DLowry-at-asu.edu
Name: David Lowry

Organization: Arizona State University

Title-Subject: [Filtered] part for Reichert Ultracut-E microtome

Question: we have a Reichert Ultracut-E microtome that needs a part, specifically the entire block-holder apparatus that clamps into the cantilever arm, with 360ƒ rotating chuck and arc segment for block adjustment. If anyone may have an old, infirm Reichert ultramicrotome in the corner from which they would be willing to sell or donate this particular part, please contact me off-line. Thank you,

David Lowry
DLowry-at-asu.edu
ph: 480-965-3210

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From: fernandezg-at-missouri.edu
Date: Mon, 29 Oct 2007 09:09:22 -0500
Subject: [Microscopy] LM vendors for black-out curtains

Contents Retrieved from Microscopy Listserver Archives
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Hi everyone,

To accommodate new light microscopes coming to our facility we need to split a couple of rooms with black-out curtains. We've seen some nice set-ups with curtains that slide on metal rails installed in the ceiling, can people recommend vendors for something like that?

Thanks in advance.

--
G. Esteban Fernandez, Ph.D.
Associate Director
Molecular Cytology Research Core Facility
University of Missouri
1201 E. Rollins St.
Columbia, MO 65211

(573)882-4895

http://www.biotech.missouri.edu/mcc


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From: xmoeinx-at-yahoo.com
Date: Mon, 29 Oct 2007 09:31:33 -0500
Subject: [Microscopy] AskAMicroscopist: electropolishing silver

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Email: xmoeinx-at-yahoo.com
Name: Moein Arzi

Organization: sharif

Education: Graduate College

Location: Tehran, Iran

Question: what is a solution of silver jet polish?

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From: bowlingads-at-hotmail.co.uk
Date: Mon, 29 Oct 2007 09:32:26 -0500
Subject: [Microscopy] AskAMicroscopist: Confocal-resolution in the z-axis

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Email: bowlingads-at-hotmail.co.uk
Name: Adam husband

Organization: shef biomed

Education: Undergraduate College

Location: sheffield, yorkshire, UK

Question: why is resolution in the z-axis is different from that in the x and y axes in confocal microscopy? this question is really bugging me, cant find many articles that explain the differences between the axes.

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From: yyang-at-cae.wisc.edu
Date: Mon, 29 Oct 2007 09:33:05 -0500
Subject: [Microscopy] viaWWW: Philips CM 200 specimen holder

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Email: yyang-at-cae.wisc.edu
Name: Yong Yang

Organization: University of WIsconsin-Madison

Title-Subject: [Filtered] Philips CM 200 specimen holder

Question: Hell everyone,

I am looking for a TEM specimen holder for Philips CM 200, and it should be double tilt (not very large angle, just regular one), but one important feature is that the sample (eletropolished, 3mm disk) can be fastened tightly on the holder to avoid be sucked onto the poles since my samples are ferritic. And our CM200 is special, since it has the narrow pole-piece gap UltraTwin pole piece.


Thanks,



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From: kenconverse-at-qualityimages.biz
Date: Mon, 29 Oct 2007 10:11:29 -0500
Subject: [Microscopy] AskAMicroscopist: Confocal-resolution in the z-axis

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Adam,
I've never used a confocal, but it seems to me that the answer is the same
as for other types of microscopes: the mechanism is completely different
for Z than for X & Y. X & Y resolution is much discussed and is based upon
wavelength contraints, numerical aperture contraints, working distance
contraints and similar items with electrons (instead of light). Since the
depth of field is going to be the biggest factor in determining the Z
resolution (which is usually considerably greater (worse) than the XY
resolution) I suspect that your Z resolution is going to be determined by
the Z axis of the stage (or however the confocal determines its slices) in
conjunction with the depth of field at any scanned point. I suspect that,
like an SEM, the scanning point by point greatly increases the depth of
field and therefore hurts Z resolution even more.

Ken Converse
owner

QUALITY IMAGES
Servicing Scanning Electron Microscopes
Since 1981
474 So. Bridgton Rd.
Bridgton, ME 04009
207-647-4348
Fax 207-647-2688
kenconverse-at-qualityimages.biz
qualityimages.biz



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Sent: Monday, October 29, 2007 10:36 AM
To: kenconverse-at-qualityimages.biz

Below is the result of your feedback form (NJZFM-ultra-55). It was
submitted by (bowlingads-at-hotmail.co.uk) from
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October 28, 2007 at 10:31:23
---------------------------------------------------------------------------

Email: bowlingads-at-hotmail.co.uk
Name: Adam husband

Organization: shef biomed

Education: Undergraduate College

Location: sheffield, yorkshire, UK

Question: why is resolution in the z-axis is different from that in the x
and y axes in confocal microscopy? this question is really bugging me, cant
find many articles that explain the differences between the axes.

---------------------------------------------------------------------------

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From: jquinn-at-www.matscieng.sunysb.edu
Date: Mon, 29 Oct 2007 15:45:54 -0500
Subject: [Microscopy] Re: LM vendors for black-out curtains

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Esteban and folks

McMaster-Carr sells all the industrial components
that you will need to set up your "curtains".

JQuinn

} From mail-at-ns.microscopy.com Mon Oct 29 09:06:28 2007
} Date: Mon, 29 Oct 2007 09:10:50 -0500
} To: jquinn-at-www.matscieng.sunysb.edu
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} Reply-to: fernandezg-at-missouri.edu
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} Hi everyone,
}
} To accommodate new light microscopes coming to our facility we need to
split a couple of rooms with black-out curtains. We've seen some nice set-ups
with curtains that slide on metal rails installed in the ceiling, can people
recommend vendors for something like that?
}
} Thanks in advance.
}
} --
} G. Esteban Fernandez, Ph.D.
} Associate Director
} Molecular Cytology Research Core Facility
} University of Missouri
} 1201 E. Rollins St.
} Columbia, MO 65211
}
} (573)882-4895
}
} http://www.biotech.missouri.edu/mcc
}
}
} ==============================Original Headers==============================
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From: randerson20-at-tampabay.rr.com
Date: Tue, 30 Oct 2007 08:56:52 -0500
Subject: [Microscopy] Microscopy Today November 2007 Table of Contents]

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Listers,

Here is the November 2007 Microscopy Today table of contents. I will
close the subscription list for this issue on Thursday November 1st, 2007.

Microscopists in North America and MSA members anywhere qualify for free
subscriptions. Anyone else may subscribe for US$50 per year (to
PARTIALLY cover postage). All subscriptions at
http://www.microscopy-today.com . Subscription rate for non-qualified
readers will go to US$60 in 2008.

Thank you.

Ron Anderson, Editor
========================
Establishing the Initial Embryonic Axis
Stephen W. Carmichael and Gary C. Schoenwolf1, Mayo Clinic and the
1University of Utah

Beyond Death: Forensic Investigations of pre-Columbian Mummies from the
Tarapacá Valley, Chile, Using Variable Pressure SEM and Raman Spectroscopy
S.V. Prikhodko, C. Fischer, R. Boytner, M. C. Lozada, M. Uribe, I.
Kakoulli, UCLA, U. of Chicago, and U. de Chile

Applications of the Helium Ion Microscope
Larry Scipioni, Lewis Stern, and John Notte, ALIS Business Unit, Carl
Zeiss SMT, Inc., Peabody, MA

Methods of Maximizing X-ray Detection in SEMs
David Rohde, Patrick Camus, Thermo Fisher Scientific, Madison, WI

Three Dimensional Imaging of Structure and Flow?Critical to Advances in
Microfluidics
Carlos Hidrovo1, and Terence Lundy2, 1Stanford University 2Hyphenated
Systems, Burlingame, CA

Is a Cs Corrector Necessary for Lorentz Vector Field Tomography?
Charudatta Phatak, Marc De Graef, Carnegie Mellon University, Pittsburgh, PA

TEM of Bacteriophages Found in Marine Sources
A. Fejeran1, J. Polanco2, G. Lander3, T. Ajero Jr3, B. Carragher3, C. S.
Potter,3 1Mount Miguel High School, Spring Valley, CA, 2Hilltop High
School, Chula Vista, CA, 3Scripps Research Institute, La Jolla, CA

Nanoscale Thermal Property Characterization of Automotive Polymer Coatings
Louis T. Germinario, Eastman Chemical Company, Kingsport, TN

Computer-Controlled Polishing System For Preparing Multiple Pre-FIB TEM
Specimens
D. J. MacMahon1 and E. Raz-Moyal2, Micron Technology, Inc. and 2Gatan,
Inc., Manassas, VA and Pleasanton, CA

Tungsten Filament Heating Effects
Paul Beauregard, Microscopist, Greensburg, TN

The Database Solution to Particle-by-Particle Analysis of Mixed Mineral
Dusts
B.R. Strohmeier, K.L. Bunker, K.E. Harris, R. Hoch, and R.J. Lee, RJ Lee
Group, Inc., Monroeville, PA

Table Top SEM Utilization in a High School Nanotechnology Course
Leonard, D.N., Appalachian State University, Boone, NC

Microscopy for Children
Caroline Schooley, Project MICRO Coordinator, MSA

Industry News

NetNotes
SAMPLE PREPARATION ? staining lipids for TEM
SAMPLE PREPARATION - staining polysaccharides for TEM
SAMPLE PREPARATION ? Thermanox coverslip
SAMPLE PREPARATION - dewaxing leaf surface for SEM
SAMPLE PREPARATION - osmium tetroxide on Lowicryl sections
SAMPLE PREPARATION ? premature polymerization
SAMPLE PREPARATION - Au on C and Al/W dendrites
SAMPLE PREPARATION ? sputter coater glass chamber
SAMPLE PREPARATION - sputter coater thickness
EM - Wi-Fi and RF interference
TEM ? contamination
SEM - tilt correction
SEM - wt% or atom%?
SEM - secondary electron detection
EDX - SDD detectors
ELECTRON DIFFRACTION
XRF in SEM-ED
GENERAL TECHNIQUES - canned air

Advertiser's Index


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From: eoptics-at-mcmaster.ca
Date: Tue, 30 Oct 2007 08:58:18 -0500
Subject: [Microscopy] viaWWW: TEM--CM12 Quad Serial Interface

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Email: eoptics-at-mcmaster.ca
Name: Fred Pearson

Organization: McMaster University

Title-Subject: [Filtered] TEM--CM12 Quad Serial Interface

Question: Good Day:

I am looking for a functioning "quad serial interface board" for the Philips CM series TEM. Ours is a CM12. If you have such item that is not being used and for sale please reply.

thanks in advance

Fred Pearson

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From: cervantes-at-bendres.com
Date: Tue, 30 Oct 2007 12:13:40 -0500
Subject: [Microscopy] TEM Help with Imaging of Micelle Solutions

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

I'd like to mine the collective knowledge of this community once again.
Every now and then, someone asks me to look at a solution of just
surfactant or bile salt micelles (i.e., sodium taurocholate/lecithin or
Polysorbate 80). They give me literature citing scattering studies that
show these micelles should be of some "TEM appropriate" size. They
usually request cryo TEM as the sample prep method, since they don't
want to perturb the system by introducing contrast agents.

What inevitably happens is that I prepare the solution for cryo TEM
(vitrify solution on Lacey Carbon grid and image) and see nothing. So
here are my questions:

1. Does anyone work with micelle systems such as these, or is it a lost
cause due to inherent low contrast, or reasons I'm not aware of? I've
done some preliminary literature searches, and found nothing
specifically on TEM imaging of surfactants or bile salt micelles alone
in solution (which may have already answered my question).

2. If so, what type of sample prep or contrast agents do you use?

Any information is much appreciated.
Thanks,
Jessica

____________________
Jessica Cervantes, MS
Research Chemist

Bend Research Inc
64550 Research Rd
Bend, OR 97701

Phone: (541) 382-0212 x240
Fax: (541) 382-6177
cervantes-at-bendres.com
www.bendres.com

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From: DusevichV-at-umkc.edu
Date: Tue, 30 Oct 2007 14:50:28 -0500
Subject: [Microscopy] Living cells in Quantimix capsules

Contents Retrieved from Microscopy Listserver Archives
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Hello,

I have a question (actually, a set of questions) about Quantimix
capsules. I know they are usable for growing sell cultures. But is it
possible to observe these sells while they are still alive, without
fixation and staining? Do I have to use special "Imaging Buffer" or
growth media will be OK? What level of magnifications can I expect?

Thanks,

Vladimir

Vladimir M. Dusevich, Ph.D.
Electron Microscope Lab Manager
371 School of Dentistry
650 E. 25th Street
Kansas City, MO 64108-2784

Phone: (816) 235-2072
Fax: (816) 235-5524
Web: http://www.umkc.edu/dentistry/microscopy



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From: gantz-at-bu.edu
Date: Tue, 30 Oct 2007 16:18:37 -0500
Subject: [Microscopy] TEM Help with Imaging of Micelle Solutions

Contents Retrieved from Microscopy Listserver Archives
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Dear Jessica,
I think that your vitreous ice cryoTEM approach is the best choice to
image micelles.
Several years ago we were studying gallstone formation and attempted to
visualize by cryoTEM the earliest stages of cholesterol nucleation using a
supersaturated model bile composed of cholesterol, lecithin, and
taurocholate in an aqueous solution with 0.15M NaCl. We were able to see
various types of unilamellar and multilamellar vesicles in a background of
micelles.
Our homemade holey carbon films were relatively thick because we were
trying to capture particles expected to be much larger than micelles. You
might want to consider very thin carbon layers. I think we were single side
blotting to concentrate the particles; there may be some trial and error in
working out the blotting times
You can take a look at the micrographs in the paper in Biophysical
Journal Vol. 76, pp.1436-1451. There are more technical details and
possibly some useful references.
Good luck, Don

Donald Gantz
Research Histologist/Electron Microscopist
Dept. Physiology and Biophysics
Center for Advanced Biomedical Research
Boston University School of Medicine
715 Albany Street
Boston, MA 02118
email: gantz-at-bu.edu


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From: Angel.Paredes-at-uth.tmc.edu
Date: Tue, 30 Oct 2007 17:19:38 -0500
Subject: [Microscopy] viaWWW: Problem with: Tecnai Polara G2 New Film camera system

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Email: Angel.Paredes-at-uth.tmc.edu
Name: Angel

Organization: University of Texas Health Science Center

Title-Subject: [Filtered] Problem with: Tecnai Polara G2 New Film camera system

Question: Hi,

We have a 300 kV Tecnai Polara G2. We now have the new redesigned low noise camera boxes with the new film cassettes. For those who have gotten the new camera system, I am have a lot of camera jams. Four since last Friday to this past Monday. Is anyone else having problems with jams using this new film camera system? Has anyone had any success fixing the problem?

Thanks,
angel

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From: nholson-at-ucsd.edu
Date: Tue, 30 Oct 2007 17:36:02 -0500
Subject: [Microscopy] Re: viaWWW: Problem with: Tecnai Polara G2 New Film

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Angel: Yes, we have been having problems as well. However, we have
not used enough film to get a definite handle on the problem (or
problems?).

1. There is a pin on a metal plate that is inside the viewing
chamber on the end nearest the user. If this pin does not come in
contact with the slide from the film box the films will jam going
back into the camera. You can see if that is the problem because
each film plate should be absolutely horizontal. With the bent pin
it won't drop the film plate evenly. That plate with the pin
attached bends easily. It can be bent back again but FEI has them
and if you wait long enough you might be able to get one.

2. Make sure the slide mechanism underneath is tight. It has four
screws, if I remember right, and if there is too much play you will
have problems.

There is a difference in the two problems. With #1 you actually get
a jammed plate with #2 the plate doesn't slide all the way into the
beam and you get a film that is exposed on only half of it.

Norm Olson
UCSD



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From: bfostermme-at-sbcglobal.net
Date: Tue, 30 Oct 2007 17:51:33 -0500
Subject: [Microscopy] EM Help with Imaging of Micelle Solutions

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear Jessica,

Contact Brigitte Sternberg - Brigitte P
Sternberg {brigittnanoanalytical-at-yahoo.com} . She has done a great
deal of cryo work in this area. I had a chance to learn more about
it at the recent SPIE meeting in San Diego and included that info in
an upcoming article in America Lab (November, most likely): "Focus on
Microscopy" column which can be found under "ARTICLES" at
www.iscpubs.com. Briggitte's website is http://nanoanalytical.netfirms.com

Hope this is helpful.

Barbara Foster, President

We've moved!
Microscopy/Microscopy Education
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MME is now scheduling customized, on-site courses through
December. Call us today for details.

P. S.
Need a good general reference or light microscopy text for next
semester? Call us today to learn more about "Optimizing LIght
Microscopy". Copies still available through MME... even for
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in the MME office for details.







At 03:33 PM 10/30/2007, gantz-at-bu.edu wrote:



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From: huisheng.jiao-at-gmail.com
Date: Wed, 31 Oct 2007 03:50:29 -0500
Subject: [Microscopy] EDX on Biology sample

Contents Retrieved from Microscopy Listserver Archives
http://www.microscopylistserver.com/MicroscopyListserver/MicroscopyArchives.html

Dear All:

Does anyone have suggestions about how to get more accurate EDX
quantitative analysis results on biology samples? A friend of mine
asked about the pratical procudure, but I just have material science
background. Thanks in advance.

Regards, Huisheng JIAO

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3, 27 -- Date: Wed, 31 Oct 2007 08:50:28 +0000
3, 27 -- From: "Huisheng JIAO" {huisheng.jiao-at-gmail.com}
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3, 27 -- Subject: EDX on Biology sample
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